Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | ACDJ02_RS02475 | Genome accession | NZ_CP167777 |
| Coordinates | 522066..522602 (+) | Length | 178 a.a. |
| NCBI ID | WP_151834016.1 | Uniprot ID | - |
| Organism | Acinetobacter ursingii strain E5131942 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 517066..527602
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDJ02_RS02470 (ACDJ02_02470) | pilY1 | 517720..522048 (+) | 4329 | WP_151834015.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACDJ02_RS02475 (ACDJ02_02475) | comE | 522066..522602 (+) | 537 | WP_151834016.1 | type IV pilin protein | Machinery gene |
| ACDJ02_RS02480 (ACDJ02_02480) | pilE | 522602..523048 (+) | 447 | WP_151834017.1 | type IV pilin protein | Machinery gene |
| ACDJ02_RS02485 (ACDJ02_02485) | rpsP | 523198..523455 (+) | 258 | WP_004923845.1 | 30S ribosomal protein S16 | - |
| ACDJ02_RS02490 (ACDJ02_02490) | rimM | 523470..524018 (+) | 549 | WP_004985145.1 | ribosome maturation factor RimM | - |
| ACDJ02_RS02495 (ACDJ02_02495) | trmD | 524072..524815 (+) | 744 | WP_151834018.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACDJ02_RS02500 (ACDJ02_02500) | rplS | 524963..525334 (+) | 372 | WP_004985149.1 | 50S ribosomal protein L19 | - |
| ACDJ02_RS02505 (ACDJ02_02505) | - | 525394..526356 (-) | 963 | WP_151834019.1 | triacylglycerol lipase | - |
| ACDJ02_RS02510 (ACDJ02_02510) | - | 526450..527490 (-) | 1041 | WP_151834020.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 19581.12 Da Isoelectric Point: 9.2708
>NTDB_id=1039305 ACDJ02_RS02475 WP_151834016.1 522066..522602(+) (comE) [Acinetobacter ursingii strain E5131942]
MQRYHAVKFNQGYTLIELMIVLVIIAIFASIAFPGYQLYMRRANAAAAQQEMQKLAEQLERHKSRNFSYRGFDAQYLYNS
TGTIPFNAASQTLTLPLNASGTGIKYNVTIVDGNGSGTLLPASTSGQSWAIQAVSTDAQNYSLLMTSTGVRCQNRTTANI
KFNTSTNVWECGVGGENW
MQRYHAVKFNQGYTLIELMIVLVIIAIFASIAFPGYQLYMRRANAAAAQQEMQKLAEQLERHKSRNFSYRGFDAQYLYNS
TGTIPFNAASQTLTLPLNASGTGIKYNVTIVDGNGSGTLLPASTSGQSWAIQAVSTDAQNYSLLMTSTGVRCQNRTTANI
KFNTSTNVWECGVGGENW
Nucleotide
Download Length: 537 bp
>NTDB_id=1039305 ACDJ02_RS02475 WP_151834016.1 522066..522602(+) (comE) [Acinetobacter ursingii strain E5131942]
ATGCAAAGATACCACGCTGTTAAGTTCAATCAAGGTTATACCTTGATTGAACTTATGATTGTACTAGTAATTATTGCAAT
ATTCGCATCTATTGCTTTTCCAGGCTATCAATTGTATATGCGTCGAGCTAACGCGGCAGCAGCTCAACAAGAAATGCAAA
AATTAGCAGAACAGTTAGAGCGCCATAAATCTAGAAATTTTAGTTATAGAGGGTTTGATGCACAATATTTATATAATTCT
ACAGGTACAATCCCTTTTAATGCAGCAAGCCAAACGTTGACATTGCCTTTAAATGCATCAGGCACAGGAATAAAATATAA
TGTTACTATTGTTGATGGCAATGGTTCGGGGACATTATTACCCGCTTCGACATCTGGTCAGAGTTGGGCAATTCAAGCTG
TAAGTACAGATGCACAAAACTATTCTCTGTTAATGACCAGTACAGGTGTTCGTTGTCAAAATAGAACTACAGCAAATATT
AAATTTAACACCTCAACAAATGTGTGGGAGTGTGGTGTAGGTGGAGAGAATTGGTAA
ATGCAAAGATACCACGCTGTTAAGTTCAATCAAGGTTATACCTTGATTGAACTTATGATTGTACTAGTAATTATTGCAAT
ATTCGCATCTATTGCTTTTCCAGGCTATCAATTGTATATGCGTCGAGCTAACGCGGCAGCAGCTCAACAAGAAATGCAAA
AATTAGCAGAACAGTTAGAGCGCCATAAATCTAGAAATTTTAGTTATAGAGGGTTTGATGCACAATATTTATATAATTCT
ACAGGTACAATCCCTTTTAATGCAGCAAGCCAAACGTTGACATTGCCTTTAAATGCATCAGGCACAGGAATAAAATATAA
TGTTACTATTGTTGATGGCAATGGTTCGGGGACATTATTACCCGCTTCGACATCTGGTCAGAGTTGGGCAATTCAAGCTG
TAAGTACAGATGCACAAAACTATTCTCTGTTAATGACCAGTACAGGTGTTCGTTGTCAAAATAGAACTACAGCAAATATT
AAATTTAACACCTCAACAAATGTGTGGGAGTGTGGTGTAGGTGGAGAGAATTGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
54.07 |
96.629 |
0.522 |
| pilY2 | Acinetobacter baumannii D1279779 |
41.209 |
100 |
0.421 |