Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | ACBW56_RS01775 | Genome accession | NZ_CP167196 |
| Coordinates | 343785..344051 (+) | Length | 88 a.a. |
| NCBI ID | WP_042635730.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain FRI-TD24 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 338785..349051
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACBW56_RS01755 (ACBW56_01755) | - | 339056..340357 (-) | 1302 | WP_014305416.1 | hemolysin family protein | - |
| ACBW56_RS01760 (ACBW56_01760) | - | 340503..341453 (+) | 951 | WP_003153082.1 | magnesium transporter CorA family protein | - |
| ACBW56_RS01765 (ACBW56_01765) | comGA | 341645..342715 (+) | 1071 | WP_003153083.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACBW56_RS01770 (ACBW56_01770) | comGB | 342702..343738 (+) | 1037 | Protein_349 | competence type IV pilus assembly protein ComGB | - |
| ACBW56_RS01775 (ACBW56_01775) | comGC | 343785..344051 (+) | 267 | WP_042635730.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACBW56_RS01780 (ACBW56_01780) | comGD | 344041..344478 (+) | 438 | WP_072588444.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACBW56_RS01785 (ACBW56_01785) | comGE | 344462..344776 (+) | 315 | WP_015388003.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACBW56_RS01790 (ACBW56_01790) | comGF | 344790..345185 (+) | 396 | WP_003153090.1 | competence type IV pilus minor pilin ComGF | - |
| ACBW56_RS01795 (ACBW56_01795) | comGG | 345186..345563 (+) | 378 | WP_014305410.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACBW56_RS01800 (ACBW56_01800) | - | 345620..345799 (+) | 180 | WP_003153093.1 | YqzE family protein | - |
| ACBW56_RS01805 (ACBW56_01805) | - | 345839..346168 (-) | 330 | WP_003153097.1 | DUF3889 domain-containing protein | - |
| ACBW56_RS01810 (ACBW56_01810) | tapA | 346427..347098 (+) | 672 | WP_330729170.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACBW56_RS01815 (ACBW56_01815) | sipW | 347070..347654 (+) | 585 | WP_012117977.1 | signal peptidase I SipW | - |
| ACBW56_RS01820 (ACBW56_01820) | tasA | 347718..348503 (+) | 786 | WP_003153102.1 | biofilm matrix protein TasA | - |
| ACBW56_RS01825 (ACBW56_01825) | sinR | 348551..348886 (-) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9721.32 Da Isoelectric Point: 6.2027
>NTDB_id=1038743 ACBW56_RS01775 WP_042635730.1 343785..344051(+) (comGC) [Bacillus velezensis strain FRI-TD24]
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
Nucleotide
Download Length: 267 bp
>NTDB_id=1038743 ACBW56_RS01775 WP_042635730.1 343785..344051(+) (comGC) [Bacillus velezensis strain FRI-TD24]
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
74.648 |
80.682 |
0.602 |