Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | KJP78_RS08105 | Genome accession | NZ_OX419553 |
| Coordinates | 1543922..1544947 (+) | Length | 341 a.a. |
| NCBI ID | WP_029726516.1 | Uniprot ID | - |
| Organism | Bacillus subtilis isolate NRS6183 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1538922..1549947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP78_RS08070 (NRS6183_08010) | ylbE | 1539222..1539461 (+) | 240 | WP_003232231.1 | YlbE-like family protein | - |
| KJP78_RS08075 (NRS6183_08015) | ylbF | 1539577..1540026 (+) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| KJP78_RS08080 (NRS6183_08020) | ylbG | 1540081..1540353 (+) | 273 | WP_024573211.1 | YlbG family protein | - |
| KJP78_RS08085 (NRS6183_08025) | rsmD | 1540676..1541230 (+) | 555 | WP_029726518.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| KJP78_RS08090 (NRS6183_08030) | coaD | 1541235..1541720 (+) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| KJP78_RS08095 (NRS6183_08035) | spoVV | 1541731..1542957 (-) | 1227 | WP_029726517.1 | dipicolinic acid transporter SpoVV | - |
| KJP78_RS08100 (NRS6183_08040) | ylbK | 1543138..1543920 (+) | 783 | WP_003232221.1 | patatin family protein | - |
| KJP78_RS08105 (NRS6183_08045) | sepM | 1543922..1544947 (+) | 1026 | WP_029726516.1 | protease DdcP | Regulator |
| KJP78_RS08110 (NRS6183_08050) | ylbM | 1544964..1546211 (-) | 1248 | WP_029726515.1 | nucleotidyltransferase | - |
| KJP78_RS08115 (NRS6183_08055) | - | 1546208..1546393 (-) | 186 | WP_003232215.1 | hypothetical protein | - |
| KJP78_RS08120 (NRS6183_08060) | ylbN | 1546421..1546939 (+) | 519 | WP_014479718.1 | DUF177 domain-containing protein | - |
| KJP78_RS08125 (NRS6183_08065) | rpmF | 1546961..1547140 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| KJP78_RS08130 (NRS6183_08070) | gerR | 1547286..1547867 (+) | 582 | WP_015383592.1 | sporulation specific transcriptional regulator GerR | - |
| KJP78_RS08135 (NRS6183_08075) | ylbP | 1547924..1548406 (-) | 483 | WP_014476736.1 | N-acetyltransferase | - |
| KJP78_RS08140 (NRS6183_08080) | - | 1548566..1549462 (+) | 897 | WP_069703524.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37650.29 Da Isoelectric Point: 8.1012
>NTDB_id=1038744 KJP78_RS08105 WP_029726516.1 1543922..1544947(+) (sepM) [Bacillus subtilis isolate NRS6183]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEKGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEKGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
Nucleotide
Download Length: 1026 bp
>NTDB_id=1038744 KJP78_RS08105 WP_029726516.1 1543922..1544947(+) (sepM) [Bacillus subtilis isolate NRS6183]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAAAAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTTAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGTTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAAAAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTTAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGTTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
39.143 |
100 |
0.402 |