Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | ACBZ91_RS10970 | Genome accession | NZ_CP167179 |
| Coordinates | 2339803..2340447 (+) | Length | 214 a.a. |
| NCBI ID | WP_014233118.1 | Uniprot ID | - |
| Organism | Vibrio natriegens strain JSH01 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2334803..2345447
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACBZ91_RS10955 (ACBZ91_10955) | - | 2335282..2336727 (-) | 1446 | WP_372377374.1 | MSHA biogenesis protein MshI | - |
| ACBZ91_RS10960 (ACBZ91_10960) | csrD | 2336739..2338748 (-) | 2010 | WP_372377375.1 | RNase E specificity factor CsrD | - |
| ACBZ91_RS10965 (ACBZ91_10965) | ssb | 2338986..2339525 (-) | 540 | WP_014233117.1 | single-stranded DNA-binding protein | Machinery gene |
| ACBZ91_RS10970 (ACBZ91_10970) | qstR | 2339803..2340447 (+) | 645 | WP_014233118.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| ACBZ91_RS10975 (ACBZ91_10975) | galU | 2340627..2341499 (+) | 873 | WP_014233119.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACBZ91_RS10980 (ACBZ91_10980) | uvrA | 2341648..2344470 (+) | 2823 | WP_372377376.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24459.46 Da Isoelectric Point: 9.9863
>NTDB_id=1038692 ACBZ91_RS10970 WP_014233118.1 2339803..2340447(+) (qstR) [Vibrio natriegens strain JSH01]
MKKSAYARKLFLISMEENAPQKVAALEKYIEIGIPVISTDALMEAKPKHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VIFNVPKRLTTDELLSFGQLKGVFYADESLERIGEGLKGIINGQNWLPRNVSSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQNGASNSRMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
MKKSAYARKLFLISMEENAPQKVAALEKYIEIGIPVISTDALMEAKPKHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VIFNVPKRLTTDELLSFGQLKGVFYADESLERIGEGLKGIINGQNWLPRNVSSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQNGASNSRMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
Nucleotide
Download Length: 645 bp
>NTDB_id=1038692 ACBZ91_RS10970 WP_014233118.1 2339803..2340447(+) (qstR) [Vibrio natriegens strain JSH01]
ATGAAAAAGTCAGCTTACGCCAGAAAGCTATTTCTGATCAGTATGGAAGAGAATGCGCCCCAAAAGGTAGCGGCACTGGA
GAAGTACATCGAGATAGGTATCCCAGTGATCTCGACGGATGCTTTAATGGAAGCGAAGCCGAAACATCGTAATAAAATCT
TACTCATCGATTTCAGTGAACATAAATCGCTTGTTCAGTCGATTAAGAATTTGCCACTGGTGTGGAAAAACTTTGAAACA
GTGATTTTTAATGTCCCAAAACGCCTGACTACGGATGAGCTGCTCTCTTTCGGCCAGCTTAAAGGCGTATTCTATGCCGA
CGAATCGCTTGAACGAATTGGGGAAGGATTAAAAGGCATCATTAATGGCCAAAACTGGTTACCTCGCAATGTGTCCAGCC
AGCTGCTTCACTACTACCGCAATGTGATCAATACGCATACCGCACCCGCGACCGTGGATCTTACCATTCGGGAATTACAA
GTGTTGCGCTGCCTTCAAAATGGGGCATCCAATAGCCGAATGGCAGAAGAGTTATTTGTGAGCGAGTTTACGATTAAGTC
TCACCTGTACCAGATTTTTAAAAAGCTCTCGGTGAAAAACCGCGTACAAGCGATTGCTTGGGCTGATCAGAATCTGATGT
CTTAA
ATGAAAAAGTCAGCTTACGCCAGAAAGCTATTTCTGATCAGTATGGAAGAGAATGCGCCCCAAAAGGTAGCGGCACTGGA
GAAGTACATCGAGATAGGTATCCCAGTGATCTCGACGGATGCTTTAATGGAAGCGAAGCCGAAACATCGTAATAAAATCT
TACTCATCGATTTCAGTGAACATAAATCGCTTGTTCAGTCGATTAAGAATTTGCCACTGGTGTGGAAAAACTTTGAAACA
GTGATTTTTAATGTCCCAAAACGCCTGACTACGGATGAGCTGCTCTCTTTCGGCCAGCTTAAAGGCGTATTCTATGCCGA
CGAATCGCTTGAACGAATTGGGGAAGGATTAAAAGGCATCATTAATGGCCAAAACTGGTTACCTCGCAATGTGTCCAGCC
AGCTGCTTCACTACTACCGCAATGTGATCAATACGCATACCGCACCCGCGACCGTGGATCTTACCATTCGGGAATTACAA
GTGTTGCGCTGCCTTCAAAATGGGGCATCCAATAGCCGAATGGCAGAAGAGTTATTTGTGAGCGAGTTTACGATTAAGTC
TCACCTGTACCAGATTTTTAAAAAGCTCTCGGTGAAAAACCGCGTACAAGCGATTGCTTGGGCTGATCAGAATCTGATGT
CTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
90.187 |
100 |
0.902 |
| qstR | Vibrio campbellii strain DS40M4 |
88.318 |
100 |
0.883 |
| qstR | Vibrio cholerae strain A1552 |
54.419 |
100 |
0.547 |