Detailed information NTG1038316

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ACB088_RS17950
• Genome accession: NZ_CP167121
• Coordinates: 3796573..3797055 (+)
• Length: 160 a.a.
• NCBI ID: WP_133747426.1
• Uniprot ID: -
• Organism: Acinetobacter sp. RW6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3791573..3802055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB088_RS17940 (ACB088_17940)	pilX	3791887..3792696 (+)	810	WP_375037616.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
ACB088_RS17945 (ACB088_17945)	pilY1	3792708..3796562 (+)	3855	WP_375037617.1	PilC/PilY family type IV pilus protein	Machinery gene
ACB088_RS17950 (ACB088_17950)	pilY2	3796573..3797055 (+)	483	WP_133747426.1	type IV pilin protein	Machinery gene
ACB088_RS17955 (ACB088_17955)	pilE	3797052..3797477 (+)	426	WP_375037618.1	type IV pilin protein	Machinery gene
ACB088_RS17960 (ACB088_17960)	rpsP	3797625..3797876 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
ACB088_RS17965 (ACB088_17965)	rimM	3797898..3798446 (+)	549	WP_003653772.1	ribosome maturation factor RimM	-
ACB088_RS17970 (ACB088_17970)	trmD	3798489..3799244 (+)	756	WP_309951714.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACB088_RS17975 (ACB088_17975)	rplS	3799464..3799832 (+)	369	WP_003653770.1	50S ribosomal protein L19	-
ACB088_RS17980 (ACB088_17980)	-	3799884..3800825 (-)	942	WP_375038823.1	lipase family alpha/beta hydrolase	-
ACB088_RS17985 (ACB088_17985)	-	3800943..3801974 (-)	1032	WP_375037619.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17475.76 Da
• Isoelectric Point: 8.4721

>NTDB_id=1038316 ACB088_RS17950 WP_133747426.1 3796573..3797055(+) (pilY2) [Acinetobacter sp. RW6]
MNKYYILRFNQGVTLIELMVVIVIVAIFASIAIPSYQGYTRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTAGNLLTNGAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1038316 ACB088_RS17950 WP_133747426.1 3796573..3797055(+) (pilY2) [Acinetobacter sp. RW6]
ATGAATAAATATTATATTCTGCGGTTTAATCAGGGAGTTACTTTGATTGAACTTATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAGGCTATACCCGTAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAATTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACCACCACATCTGTAACGTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGACACAACAGCAGGAAATTTATTGACGAATGGTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACAACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-124)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	40.698	100	0.438