Detailed information NTG1038315

Bioinformatically predicted

Overview

• Name: pilY1
• Type: Machinery gene
• Locus tag: ACB088_RS17945
• Genome accession: NZ_CP167121
• Coordinates: 3792708..3796562 (+)
• Length: 1284 a.a.
• NCBI ID: WP_375037617.1
• Uniprot ID: -
• Organism: Acinetobacter sp. RW6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3787708..3801562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB088_RS17915 (ACB088_17915)	gmk	3787985..3788614 (-)	630	WP_003653783.1	guanylate kinase	-
ACB088_RS17920 (ACB088_17920)	ispH	3788737..3789687 (+)	951	WP_375037614.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
ACB088_RS17925 (ACB088_17925)	fimU	3789860..3790333 (+)	474	WP_375037615.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
ACB088_RS17930 (ACB088_17930)	pilV	3790327..3790886 (+)	560	Protein_3494	type IV pilus modification protein PilV	-
ACB088_RS17935 (ACB088_17935)	pilW	3790886..3791890 (+)	1005	WP_133747425.1	PilW family protein	Machinery gene
ACB088_RS17940 (ACB088_17940)	pilX	3791887..3792696 (+)	810	WP_375037616.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
ACB088_RS17945 (ACB088_17945)	pilY1	3792708..3796562 (+)	3855	WP_375037617.1	PilC/PilY family type IV pilus protein	Machinery gene
ACB088_RS17950 (ACB088_17950)	pilY2	3796573..3797055 (+)	483	WP_133747426.1	type IV pilin protein	Machinery gene
ACB088_RS17955 (ACB088_17955)	pilE	3797052..3797477 (+)	426	WP_375037618.1	type IV pilin protein	Machinery gene
ACB088_RS17960 (ACB088_17960)	rpsP	3797625..3797876 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
ACB088_RS17965 (ACB088_17965)	rimM	3797898..3798446 (+)	549	WP_003653772.1	ribosome maturation factor RimM	-
ACB088_RS17970 (ACB088_17970)	trmD	3798489..3799244 (+)	756	WP_309951714.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACB088_RS17975 (ACB088_17975)	rplS	3799464..3799832 (+)	369	WP_003653770.1	50S ribosomal protein L19	-
ACB088_RS17980 (ACB088_17980)	-	3799884..3800825 (-)	942	WP_375038823.1	lipase family alpha/beta hydrolase	-

Sequence

Protein

• Length: 1284 a.a.
• Molecular weight: 137691.20 Da
• Isoelectric Point: 7.7369

>NTDB_id=1038315 ACB088_RS17945 WP_375037617.1 3792708..3796562(+) (pilY1) [Acinetobacter sp. RW6]
MKLKLKNFKPNNLWYAICSSSLAFTWLVTSSVVQASDLQIYASPTAGKKTIVMMLDTSGSMTSNSYNENRLAMLKNGMNA
FLASNNPILNDTRVGLGNFSANGDSRSGQILVAAAPLGGASTLNTVGSQRYKLKQAVANLSAGGSTPSAHAYAEAAAYLM
GTSTYSEANYAIRKDSYIKRVRKSDNRTEYSYCTNYRDSQIDTANLWQPCRSSSYWSSWSTSNPGVNTATAYDTSSDLTY
SYTYYYTTFNYAIANADSGVPKSKTNDTTSNPNIVLDRNASNLNAIYQSPLPAVANRQSCDGQGIYFLSDGEPNNTTNTR
SATVMSTALGSTLGADFNCSGGLSNTSSDSGWACMGEFAKRLFDKTKNPAGVSIQTAFVGFGSDFSSLSSSDVKNACRLS
SRTQSDRKGDDACSPNQATNAVATPGYGNGGFFPTQSSQGVTDSVIAFINNLDKVPLEPLTTGAISVPYDALNPKNLQEY
GYLRAFEPNPANTYLTWRGNLKKYHVVLSGANAGAFEANTGGLVYNASGAFRTGTKDYWNSSTYNDGGNVFLGGSYTKVP
LPIAGQNETRDAEGNITKYYYAIQSKIRNLFTDVSAVAADGSLTKISTSGTNLLRIPAAPPEGTNPFDSVANTANYVLGK
LNASTGQDILKAFPISLKLKILNYLGYSTDISATTLPSSLVTSNEPYLSMGGSIHSLPVQLTYNGTLDENGNLTSAREQS
ILYGTMEGGLHIVDASTGVEQMAFVPADILNDPVASKALVVGQSDVTAPAHGMDGAWVSDPAYSITTTGSGSSAVSKVTA
KQMNIYGGMRMGGSSYYGLNVLNPASPKLLFRVGADQTDYSRMGQSWSKPVLANIRYNGVIKRVMIVGGGYDQCYENPNI
TLSNSCFTNGKAKGNAVYIIDAKTGERLWWTSDTGSNIDNSNMKHSIVSRISTLDRDADGLVDHLYFGDLGGQVFRIDLN
NNQTKTNSTYSSFGIRVVRLANLATNDSTYDASNDYTAGNAPRFYEPPTVTIHDYGIRTFITVGIVSGDRSTPLDVYPLT
GREGMSPSTALSGRPVNNVYGIIDKDFIKKNLMSLTDSQLETKDITRSTLRKNPQILRSGETRVAQIFFPNTGAGQNGWY
RSLSSMSDGTEKANNSFRIKGGLKAFEEPMAITGTLIVPVYDPQGTGIVAADPCLPRVVGETDQQTFCLPFGACLNSDGS
IDQNKENGSGFKTQTGTNCPVGASECNKDVIGSGIRGIAFVPKRDEPPVTNSCGKLQLSGNESGTGEWQCTSYLVPARWY
ERYR

Nucleotide

• Length: 3855 bp

>NTDB_id=1038315 ACB088_RS17945 WP_375037617.1 3792708..3796562(+) (pilY1) [Acinetobacter sp. RW6]
GTGAAACTAAAATTGAAGAATTTTAAGCCAAATAATTTATGGTATGCCATCTGTTCGAGTTCGCTTGCTTTTACATGGTT
GGTGACAAGCTCCGTCGTGCAGGCGAGTGATTTACAAATTTATGCTTCACCTACGGCTGGTAAAAAAACGATTGTAATGA
TGTTGGATACTTCGGGGAGTATGACGTCTAATAGTTATAACGAAAATCGTTTAGCTATGCTTAAAAATGGTATGAATGCT
TTTTTAGCCAGTAATAATCCTATTTTAAATGATACTCGTGTGGGCTTAGGTAATTTCTCTGCAAATGGTGATAGTCGAAG
TGGGCAAATTTTGGTGGCTGCTGCTCCCTTAGGAGGTGCAAGTACTTTAAATACGGTGGGGTCTCAGCGTTATAAATTAA
AACAGGCAGTTGCAAATTTATCTGCTGGTGGGTCAACGCCTTCAGCACATGCTTATGCAGAAGCTGCTGCTTATTTAATG
GGTACATCGACCTATTCAGAGGCGAATTATGCTATTCGGAAAGATAGTTATATAAAGCGTGTGCGAAAATCAGATAATAG
AACGGAATACTCATATTGTACGAATTATCGTGATTCACAAATTGATACGGCAAATCTATGGCAGCCTTGTCGCTCTAGTA
GTTATTGGAGTAGCTGGTCAACCTCTAATCCGGGTGTAAATACGGCAACTGCTTATGATACTTCGTCTGATTTAACCTAT
TCCTATACTTATTACTACACCACTTTTAATTACGCTATAGCAAATGCAGATAGTGGTGTTCCAAAATCAAAAACAAATGA
TACGACAAGCAATCCGAATATTGTTTTAGATAGAAATGCTTCTAACTTAAACGCCATTTATCAATCTCCTTTGCCTGCAG
TGGCTAATCGTCAAAGTTGTGATGGACAGGGTATTTACTTTTTATCAGATGGTGAGCCGAACAATACAACAAATACACGT
TCGGCAACTGTAATGTCGACGGCCTTAGGTAGTACTTTGGGAGCAGATTTTAATTGCTCTGGAGGGCTTTCTAATACTTC
ATCAGATTCTGGTTGGGCTTGTATGGGGGAATTTGCGAAACGACTATTTGATAAAACAAAAAACCCTGCTGGAGTTTCTA
TTCAAACAGCATTTGTTGGTTTTGGTAGTGATTTTTCTAGCTTAAGTTCTTCGGATGTAAAAAATGCTTGCCGTTTAAGT
TCGAGAACTCAGTCTGACCGAAAAGGAGATGATGCGTGTTCACCGAATCAGGCCACAAATGCGGTAGCGACACCTGGTTA
TGGGAATGGTGGTTTTTTTCCTACTCAGAGTTCACAAGGGGTAACAGACAGCGTTATCGCATTTATTAATAACTTAGATA
AAGTTCCTTTAGAACCCTTAACCACAGGTGCTATCTCAGTTCCTTATGATGCATTAAATCCTAAAAATTTACAGGAATAT
GGTTACTTACGTGCTTTTGAGCCAAATCCGGCTAACACATACTTAACATGGCGTGGAAATTTAAAGAAATATCATGTTGT
TTTATCTGGGGCCAATGCTGGTGCTTTTGAGGCCAATACTGGCGGATTAGTTTACAATGCAAGTGGGGCTTTTAGGACTG
GAACAAAAGACTATTGGAATAGCTCTACTTATAATGACGGAGGTAATGTCTTTTTAGGTGGTTCATATACAAAAGTTCCT
TTACCAATTGCTGGACAAAATGAAACACGTGATGCAGAAGGAAATATCACAAAATATTATTACGCAATACAAAGTAAAAT
TCGCAACTTATTTACTGATGTTTCCGCCGTTGCAGCGGATGGTAGCTTAACGAAAATATCGACTTCTGGAACTAATTTGC
TAAGAATTCCTGCTGCTCCACCAGAAGGAACTAATCCTTTTGATAGTGTGGCTAATACAGCAAATTATGTTTTAGGAAAA
TTAAATGCATCAACTGGACAAGATATTTTAAAAGCTTTCCCAATTAGCTTGAAATTAAAAATATTAAATTATCTAGGTTA
CTCCACTGATATTAGCGCTACGACTTTACCTTCGTCATTAGTTACATCGAATGAACCATATTTATCGATGGGTGGTAGTA
TTCACTCTTTACCAGTACAGCTTACCTATAATGGAACATTAGATGAAAATGGGAATTTAACATCTGCGCGTGAACAATCC
ATTCTCTATGGAACGATGGAAGGCGGCCTGCATATTGTGGATGCCTCAACTGGTGTAGAACAAATGGCTTTTGTTCCCGC
CGATATATTAAATGATCCAGTTGCATCAAAAGCTTTAGTGGTTGGCCAAAGTGATGTCACAGCTCCTGCTCACGGTATGG
ATGGGGCTTGGGTATCTGACCCTGCATATAGTATTACTACAACGGGAAGCGGTAGCTCAGCAGTATCAAAAGTAACTGCA
AAGCAAATGAATATTTATGGTGGCATGCGAATGGGTGGCAGCAGTTATTATGGCTTAAATGTCTTAAATCCTGCCTCACC
AAAGCTCCTGTTTAGAGTTGGTGCAGACCAAACTGATTATAGTCGTATGGGGCAGAGTTGGTCTAAACCTGTGCTTGCAA
ATATACGTTATAACGGGGTGATTAAACGGGTTATGATTGTTGGTGGTGGCTACGACCAATGTTATGAGAACCCAAATATT
ACCTTGAGCAACTCTTGCTTTACGAATGGAAAAGCAAAAGGGAATGCTGTTTATATTATTGATGCTAAAACTGGGGAACG
CTTATGGTGGACTAGTGATACAGGCTCTAATATAGATAACTCTAATATGAAGCACAGTATTGTTAGTCGCATTAGTACCT
TAGATCGAGATGCTGATGGTTTGGTAGACCATTTATATTTCGGTGATTTAGGCGGACAAGTCTTCCGTATCGATCTTAAT
AATAACCAGACAAAAACAAATTCAACTTATAGCAGTTTCGGTATTCGAGTTGTTCGATTAGCCAATTTAGCAACGAATGA
CTCAACTTATGATGCCTCGAACGACTATACCGCTGGGAATGCGCCGCGTTTTTATGAACCGCCAACAGTGACAATTCACG
ATTATGGAATCCGCACTTTTATTACTGTAGGTATTGTTTCAGGTGACCGTAGTACGCCTTTAGATGTTTATCCGCTTACA
GGACGTGAGGGGATGTCACCTAGCACGGCATTAAGCGGAAGACCTGTAAACAACGTCTATGGAATTATCGATAAAGACTT
TATTAAAAAGAATTTAATGTCTTTGACTGATAGCCAACTTGAAACAAAAGATATTACTCGATCGACGCTTCGAAAAAATC
CACAAATTTTACGATCTGGAGAAACACGAGTAGCACAGATTTTCTTTCCCAACACTGGGGCGGGACAAAATGGTTGGTAT
CGTTCACTTTCTAGTATGAGCGATGGTACCGAGAAAGCTAATAATAGTTTCCGTATTAAAGGTGGGCTAAAAGCTTTTGA
AGAGCCTATGGCAATTACAGGGACTTTAATTGTGCCTGTTTATGACCCGCAGGGAACAGGTATTGTAGCGGCAGACCCAT
GTTTACCCCGTGTAGTAGGTGAAACTGACCAGCAGACGTTCTGTTTACCATTTGGCGCCTGCCTTAATTCTGATGGGTCA
ATCGATCAAAATAAAGAAAATGGAAGTGGGTTTAAAACACAAACTGGTACTAATTGCCCAGTAGGAGCCTCTGAATGTAA
TAAAGACGTTATTGGCTCCGGTATTCGCGGCATAGCATTTGTTCCAAAAAGAGATGAACCTCCAGTGACTAATAGTTGTG
GCAAATTACAACTGTCTGGAAACGAGAGTGGAACGGGCGAATGGCAGTGTACAAGCTACTTAGTTCCTGCGCGTTGGTAT
GAGCGTTATCGCTAA

Domains

Predicted by InterproScan.

• von Willebrand factor type A domain (VWA_2) (51-102)

• Neisseria PilC beta-propeller domain (T4P_PilY1) (715-965)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY1	Acinetobacter baumannii D1279779	84.031	100	0.844