Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACB363_RS01685 | Genome accession | NZ_CP167021 |
| Coordinates | 322182..322673 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain Isolate 5 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 317182..327673
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACB363_RS01655 (ACB363_01655) | - | 318371..318871 (+) | 501 | WP_021299043.1 | phosphatase PAP2 family protein | - |
| ACB363_RS01660 (ACB363_01660) | trxA | 318934..319266 (+) | 333 | WP_257577416.1 | thioredoxin | - |
| ACB363_RS01665 (ACB363_01665) | - | 319318..319905 (-) | 588 | WP_011528942.1 | helix-turn-helix domain-containing protein | - |
| ACB363_RS01670 (ACB363_01670) | mutY | 320082..321236 (-) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| ACB363_RS01675 (ACB363_01675) | - | 321404..321697 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| ACB363_RS01680 (ACB363_01680) | rpsF | 321870..322160 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| ACB363_RS01685 (ACB363_01685) | ssb | 322182..322673 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| ACB363_RS01690 (ACB363_01690) | rpsR | 322837..323076 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| ACB363_RS01695 (ACB363_01695) | - | 323207..323863 (-) | 657 | WP_011528940.1 | DUF1129 domain-containing protein | - |
| ACB363_RS01700 (ACB363_01700) | - | 323995..324939 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=1037904 ACB363_RS01685 WP_002983122.1 322182..322673(+) (ssb) [Streptococcus pyogenes strain Isolate 5]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1037904 ACB363_RS01685 WP_002983122.1 322182..322673(+) (ssb) [Streptococcus pyogenes strain Isolate 5]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAGGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAGGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |