Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACB327_RS06965 | Genome accession | NZ_CP167020 |
| Coordinates | 1405912..1406403 (-) | Length | 163 a.a. |
| NCBI ID | WP_371400063.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain Isolate 6 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1400912..1411403
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACB327_RS06950 (ACB327_06950) | - | 1403643..1404587 (+) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
| ACB327_RS06955 (ACB327_06955) | - | 1404719..1405375 (+) | 657 | WP_002983144.1 | DUF1129 domain-containing protein | - |
| ACB327_RS06960 (ACB327_06960) | rpsR | 1405508..1405747 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| ACB327_RS06965 (ACB327_06965) | ssb | 1405912..1406403 (-) | 492 | WP_371400063.1 | single-stranded DNA-binding protein | Machinery gene |
| ACB327_RS06970 (ACB327_06970) | rpsF | 1406425..1406715 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| ACB327_RS06975 (ACB327_06975) | - | 1406888..1407181 (-) | 294 | WP_002983113.1 | hypothetical protein | - |
| ACB327_RS06980 (ACB327_06980) | mutY | 1407349..1408503 (+) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| ACB327_RS06985 (ACB327_06985) | - | 1408668..1409192 (+) | 525 | Protein_1320 | helix-turn-helix domain-containing protein | - |
| ACB327_RS06990 (ACB327_06990) | trxA | 1409238..1409570 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| ACB327_RS06995 (ACB327_06995) | - | 1409633..1410133 (-) | 501 | WP_021775467.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17997.76 Da Isoelectric Point: 4.8894
>NTDB_id=1037875 ACB327_RS06965 WP_371400063.1 1405912..1406403(-) (ssb) [Streptococcus pyogenes strain Isolate 6]
MINNVVLVGRMTKDSELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDSELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1037875 ACB327_RS06965 WP_371400063.1 1405912..1406403(-) (ssb) [Streptococcus pyogenes strain Isolate 6]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATTCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATTCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |