Detailed information NTG1037229

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ACB353_RS00335
• Genome accession: NZ_CP167008
• Coordinates: 52557..53468 (+)
• Length: 303 a.a.
• NCBI ID: WP_002986681.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain Isolate 23
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 47557..58468

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB353_RS00315 (ACB353_00315)	purE	48143..48634 (+)	492	WP_002987716.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
ACB353_RS00320 (ACB353_00320)	purK	48621..49694 (+)	1074	WP_021340856.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
ACB353_RS00325 (ACB353_00325)	-	49696..51114 (+)	1419	WP_011888524.1	hypothetical protein	-
ACB353_RS00330 (ACB353_00330)	purB	51134..52426 (+)	1293	WP_011284409.1	adenylosuccinate lyase	-
ACB353_RS00335 (ACB353_00335)	comR	52557..53468 (+)	912	WP_002986681.1	transcriptional regulator Rgg4/ComR	Regulator
ACB353_RS00340 (ACB353_00340)	comS	53552..53647 (+)	96	WP_198462994.1	quorum-sensing system DWW-type pheromone	Regulator
ACB353_RS00345 (ACB353_00345)	ruvB	53694..54692 (+)	999	WP_011054100.1	Holliday junction branch migration DNA helicase RuvB	-
ACB353_RS00350 (ACB353_00350)	-	54830..55267 (+)	438	WP_002994668.1	low molecular weight protein-tyrosine-phosphatase	-
ACB353_RS00355 (ACB353_00355)	-	55290..55691 (+)	402	WP_002986671.1	MORN repeat-containing protein	-
ACB353_RS00360 (ACB353_00360)	-	55688..57463 (+)	1776	WP_011284411.1	acyltransferase family protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35757.27 Da
• Isoelectric Point: 4.4858

>NTDB_id=1037229 ACB353_RS00335 WP_002986681.1 52557..53468(+) (comR) [Streptococcus pyogenes strain Isolate 23]
MLEHFGGKVKVLRLEKRISREDLCGDESELSVRQLARIELGQSIPSLSKVIFIAKALNVSVGYLTDGADLELPKRYKELK
YLILRTPTYMDDGKLQVREEQFDEIFEDYYDKLPEEEKIIIDCLQATLDTLLSENTNFGIDLLQEYFNQIKTKVRFRQND
LILLELYLAYLDIEGMDGQYSDKIFYDSLLDNLSEQFEQFELDELFIVNKIIIDISSLSLKNNRLDNLEKAIEMSQKIMA
KIQDWNRMPILKLIEWKYFLIKQKDIIKAEQSFMKACLFAQMTADQYLENKLIQEWEKDVKSY

Nucleotide

• Length: 912 bp

>NTDB_id=1037229 ACB353_RS00335 WP_002986681.1 52557..53468(+) (comR) [Streptococcus pyogenes strain Isolate 23]
ATGTTAGAACATTTTGGTGGAAAAGTAAAAGTGTTAAGACTTGAAAAGAGGATTAGTCGCGAGGACTTGTGTGGGGATGA
GTCTGAACTTTCTGTTCGTCAATTAGCACGGATAGAACTAGGTCAATCCATACCAAGTTTAAGTAAGGTTATTTTTATTG
CAAAAGCCTTAAACGTTAGTGTCGGTTACTTAACTGATGGTGCTGATTTAGAACTACCTAAGCGTTACAAAGAATTAAAA
TACCTTATCTTAAGGACACCAACTTACATGGATGATGGAAAATTACAAGTACGAGAAGAGCAGTTTGATGAAATTTTTGA
GGATTATTATGATAAATTACCAGAGGAAGAGAAAATAATCATTGATTGTTTACAGGCAACTTTAGATACTTTATTGAGTG
AGAATACTAACTTTGGCATTGACTTACTTCAAGAATATTTTAATCAAATAAAGACTAAGGTACGCTTTAGGCAAAATGAT
TTAATACTTCTAGAATTATATTTAGCTTATCTTGATATTGAGGGAATGGATGGACAATATTCAGATAAGATTTTTTATGA
TTCTTTATTAGATAATCTATCAGAACAATTTGAACAATTTGAATTAGATGAATTATTTATAGTTAATAAGATTATCATTG
ATATTTCATCACTAAGCTTAAAAAATAACCGACTTGATAATTTAGAAAAAGCGATTGAAATGAGTCAAAAAATTATGGCG
AAAATTCAAGATTGGAATAGAATGCCTATTTTAAAACTAATAGAATGGAAATATTTTTTAATCAAACAAAAAGATATAAT
AAAAGCAGAACAATCATTTATGAAGGCATGTTTGTTCGCCCAAATGACAGCTGATCAGTATTTGGAAAACAAGTTAATTC
AAGAGTGGGAAAAAGATGTTAAAAGTTATTAA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (12-64)

• ComR tetratricopeptide (ComR_TPR) (73-296)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus pyogenes MGAS8232	100	100	1
comR	Streptococcus pyogenes MGAS315	58.472	99.34	0.581
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	51.37	96.37	0.495
comR	Streptococcus mutans UA159	46.358	99.67	0.462