Detailed information NTG1036276

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AB9V61_RS01665
• Genome accession: NZ_CP166925
• Coordinates: 360446..361510 (+)
• Length: 354 a.a.
• NCBI ID: WP_002551652.1
• Uniprot ID: A0A7Z6Y2Y4
• Organism: Pseudomonas savastanoi pv. phaseolicola strain HB10Y
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 355446..366510

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9V61_RS01655 (AB9V61_01655)	-	355921..357189 (+)	1269	WP_011167463.1	malic enzyme-like NAD(P)-binding protein	-
AB9V61_RS01660 (AB9V61_01660)	-	357795..360236 (-)	2442	WP_371217760.1	penicillin-binding protein 1A	-
AB9V61_RS01665 (AB9V61_01665)	pilM	360446..361510 (+)	1065	WP_002551652.1	pilus assembly protein PilM	Machinery gene
AB9V61_RS01670 (AB9V61_01670)	-	361510..362109 (+)	600	WP_004654254.1	PilN domain-containing protein	-
AB9V61_RS01675 (AB9V61_01675)	pilO	362106..362729 (+)	624	WP_002551654.1	type 4a pilus biogenesis protein PilO	-
AB9V61_RS01680 (AB9V61_01680)	pilP	362726..363253 (+)	528	WP_002551655.1	type 4a pilus biogenesis lipoprotein PilP	-
AB9V61_RS01685 (AB9V61_01685)	pilQ	363301..365406 (+)	2106	WP_011167465.1	type IV pilus secretin PilQ	Machinery gene
AB9V61_RS01690 (AB9V61_01690)	aroK	365411..365929 (+)	519	WP_002551657.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38078.57 Da
• Isoelectric Point: 4.7008

>NTDB_id=1036276 AB9V61_RS01665 WP_002551652.1 360446..361510(+) (pilM) [Pseudomonas savastanoi pv. phaseolicola strain HB10Y]
MFELFSKKANTLLGIDISSTSVKLLELSRSGTRYKVESYAVEPLPANAVVEKNIAELEGVGQALSRVLAKAKTSVKIVAV
AVAGSAVITKTIEMDAGLSDDDMENQLKLEADQYIPYPLEEVAIDFEVQGYSVRNPERVEVLLAACRKENVEVREAALAL
AGLTARVVDVEAYALERSFGLLAAQLGNGHDELTVAVVDIGATMTTLSVLHHGRIIYTREQLFGGRQLTDEIQRRYGLSM
EEAGLAKKQGGLPDDYVSEVLDPFKDALVQQVSRSLQFFFAAGQYNSVDHIMLAGGTASISGLEHLIQRRIGTPTMVANP
FADMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1036276 AB9V61_RS01665 WP_002551652.1 360446..361510(+) (pilM) [Pseudomonas savastanoi pv. phaseolicola strain HB10Y]
GTGTTCGAACTCTTCAGTAAGAAGGCCAACACCCTTCTAGGGATCGATATTAGCTCCACCTCGGTAAAACTCCTGGAATT
GAGTCGTTCCGGCACTCGTTACAAGGTCGAGTCTTACGCAGTCGAGCCGTTGCCGGCCAACGCTGTCGTCGAAAAGAATA
TTGCCGAGCTCGAAGGAGTTGGTCAGGCGCTGTCTCGCGTGCTCGCCAAGGCCAAGACCAGCGTCAAGATCGTGGCGGTC
GCCGTAGCCGGTTCCGCCGTGATCACCAAGACGATTGAAATGGACGCCGGTCTTTCCGACGACGACATGGAAAACCAGCT
CAAGCTTGAGGCTGACCAGTACATCCCTTATCCGCTGGAAGAAGTCGCCATCGATTTCGAAGTGCAGGGCTACTCGGTGC
GCAATCCCGAACGCGTCGAAGTATTGCTGGCTGCCTGCCGCAAAGAGAACGTCGAAGTGCGTGAGGCGGCGCTGGCTCTG
GCCGGGCTGACCGCGCGCGTGGTGGACGTCGAGGCCTATGCCCTGGAGCGCTCGTTCGGCCTGCTGGCTGCGCAACTGGG
TAACGGTCATGACGAGCTTACCGTGGCGGTGGTCGATATCGGCGCCACCATGACCACCCTCAGCGTGCTGCATCATGGCC
GGATCATCTATACCCGCGAGCAACTGTTCGGCGGCCGCCAGCTGACTGACGAAATCCAGCGCCGCTATGGCCTTTCCATG
GAGGAGGCCGGGCTTGCCAAGAAGCAGGGCGGGTTGCCCGACGACTATGTCAGCGAGGTGCTGGACCCCTTCAAGGATGC
GTTGGTGCAGCAGGTCTCCCGTTCTTTGCAGTTCTTCTTTGCGGCCGGTCAATACAACTCCGTGGATCACATCATGCTGG
CAGGCGGCACGGCTTCGATTTCAGGGCTGGAGCATTTGATTCAACGACGCATTGGCACCCCGACGATGGTCGCTAACCCG
TTTGCCGACATGGCCCTGAGCTCCAAGGTCAATGCCGGGGCGCTGGCCAGTGACGCTCCCGCGTTGATGATCGCGTGCGG
TCTGGCGTTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A7Z6Y2Y4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.215	100	0.562
comM	Acinetobacter nosocomialis M2	56.215	100	0.562
comM	Acinetobacter baylyi ADP1	53.672	100	0.537
pilM	Legionella pneumophila strain ERS1305867	46.761	100	0.469