Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   MMH06_RS06015 Genome accession   NZ_OV904788
Coordinates   1133708..1134385 (+) Length   225 a.a.
NCBI ID   WP_000548959.1    Uniprot ID   Q9S1K2
Organism   Streptococcus pneumoniae strain RMV7 isolate RMV7domi     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1128708..1139385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMH06_RS05975 - 1128813..1128926 (-) 114 Protein_1138 glutamine ABC transporter permease -
  MMH06_RS05985 (IONPJBJN_01173) - 1129057..1129703 (-) 647 Protein_1139 nicotinamide mononucleotide transporter -
  MMH06_RS11005 - 1129729..1129920 (-) 192 WP_001816503.1 hypothetical protein -
  MMH06_RS05990 (IONPJBJN_01174) - 1129901..1130551 (-) 651 WP_000188505.1 metal-dependent transcriptional regulator -
  MMH06_RS05995 (IONPJBJN_01175) - 1130663..1131505 (+) 843 WP_000160938.1 metallophosphoesterase family protein -
  MMH06_RS06000 (IONPJBJN_01176) - 1131581..1132018 (+) 438 WP_001166785.1 Rrf2 family transcriptional regulator -
  MMH06_RS06005 (IONPJBJN_01177) - 1132086..1132388 (+) 303 WP_000281609.1 hypothetical protein -
  MMH06_RS06010 (IONPJBJN_01178) - 1132479..1133552 (-) 1074 WP_001273823.1 DUF2974 domain-containing protein -
  MMH06_RS06015 (IONPJBJN_01179) braR 1133708..1134385 (+) 678 WP_000548959.1 response regulator transcription factor Regulator
  MMH06_RS06020 (IONPJBJN_01180) - 1134378..1135352 (+) 975 WP_000887953.1 HAMP domain-containing histidine kinase -
  MMH06_RS06025 (IONPJBJN_01181) thrS 1135401..1137344 (-) 1944 WP_000608349.1 threonine--tRNA ligase -
  MMH06_RS06030 - 1137402..1137578 (-) 177 WP_000166031.1 MazG-like protein -
  MMH06_RS06035 (IONPJBJN_01182) - 1137585..1137725 (-) 141 WP_000422775.1 MazG-like protein -
  MMH06_RS06040 (IONPJBJN_01183) - 1138155..1138355 (-) 201 WP_001814296.1 hypothetical protein -
  MMH06_RS06045 (IONPJBJN_01184) - 1138593..1139222 (+) 630 WP_000762091.1 NAD(P)-dependent oxidoreductase -

Sequence


Protein


Download         Length: 225 a.a.        Molecular weight: 25964.16 Da        Isoelectric Point: 5.1362

>NTDB_id=1035869 MMH06_RS06015 WP_000548959.1 1133708..1134385(+) (braR) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
MHKILLIEDDQVIRQQIGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=1035869 MMH06_RS06015 WP_000548959.1 1133708..1134385(+) (braR) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
ATGCACAAGATTTTATTAATAGAAGATGATCAGGTCATTCGTCAACAGATTGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGGGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCTAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9S1K2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471

  vicR Streptococcus mutans UA159

35.319

100

0.369


Multiple sequence alignment