Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ABKQ09_RS15730 Genome accession   NZ_CP166870
Coordinates   3132446..3134740 (-) Length   764 a.a.
NCBI ID   WP_268532909.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain F4     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3127446..3139740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKQ09_RS15690 (ABKQ09_15685) - 3127917..3128348 (+) 432 WP_003327161.1 Na(+)/H(+) antiporter subunit B -
  ABKQ09_RS15695 (ABKQ09_15690) - 3128348..3128689 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  ABKQ09_RS15700 (ABKQ09_15695) - 3128682..3130163 (+) 1482 WP_268365636.1 Na+/H+ antiporter subunit D -
  ABKQ09_RS15705 (ABKQ09_15700) - 3130169..3130645 (+) 477 WP_003327158.1 Na+/H+ antiporter subunit E -
  ABKQ09_RS15710 (ABKQ09_15705) - 3130645..3130929 (+) 285 WP_003327157.1 Na(+)/H(+) antiporter subunit F1 -
  ABKQ09_RS15715 (ABKQ09_15710) mnhG 3130913..3131287 (+) 375 WP_003327156.1 monovalent cation/H(+) antiporter subunit G -
  ABKQ09_RS15720 (ABKQ09_15715) - 3131326..3131706 (-) 381 WP_371176080.1 hotdog fold thioesterase -
  ABKQ09_RS15725 (ABKQ09_15720) comA 3131724..3132365 (-) 642 WP_003327154.1 response regulator transcription factor Regulator
  ABKQ09_RS15730 (ABKQ09_15725) comP 3132446..3134740 (-) 2295 WP_268532909.1 histidine kinase Regulator
  ABKQ09_RS15735 (ABKQ09_15730) - 3134748..3134909 (-) 162 WP_061669362.1 competence pheromone ComX -
  ABKQ09_RS15740 (ABKQ09_15735) - 3134925..3135785 (-) 861 WP_061669434.1 polyprenyl synthetase family protein -
  ABKQ09_RS15745 (ABKQ09_15740) degQ 3135969..3136112 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  ABKQ09_RS15750 (ABKQ09_15745) - 3136572..3136931 (+) 360 WP_106033956.1 hypothetical protein -
  ABKQ09_RS15755 (ABKQ09_15750) - 3136950..3138182 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 764 a.a.        Molecular weight: 88386.05 Da        Isoelectric Point: 8.4972

>NTDB_id=1035779 ABKQ09_RS15730 WP_268532909.1 3132446..3134740(-) (comP) [Bacillus atrophaeus strain F4]
MKARYNKISILLVLMSLVYVIYLTYISNNNLLVGASVSKNKKSDVVITNVEDYTMAYYSGIQKGDIVKRINNSNINPNEI
KMNKLKNVSSMIVERDGKNVELKLTLLNDKNFSTYLIPLIFYAVCLFCCLFILKINESKNLLSALILIVFLLSASIAFIS
AGGSTKGDLLSRCMMVLTLISVPLNYLLFLYQYFKELGTILFSKKVFILYLIPAINVVCELFRSYLFFRDYVPKLNLLSF
FILFIIVGIYFVLILMKNKDTEQAHIIKILAIINIFSFSPFLCLYLIPYVFLNAHYVSSFLSASFMLLIPFSLVYQFMTN
KIYNIDFILSRLKYYGFLALTPTIILISTIELFRSPESDYYNIKLTLLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SVYKFTQLIRDSSSVTQVFGELKTTILEVLLVSRAHIYEVTFDGNIKPYEEVNLHSYHDIYQKQFSKVISEIGKIVEFNN
GFVMKIGERGGKSFVILCLSKMNTPRLTLEEISWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYDLGLVK
ALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQASEVLIMLISFQNKIVLHYEDDGVGFDK
EKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2295 bp        

>NTDB_id=1035779 ABKQ09_RS15730 WP_268532909.1 3132446..3134740(-) (comP) [Bacillus atrophaeus strain F4]
ATGAAGGCTAGATATAATAAAATTTCTATTCTGTTAGTTTTGATGAGCTTGGTATATGTAATATATTTAACTTATATTAG
TAATAATAATTTGTTAGTTGGAGCATCTGTTTCTAAAAATAAAAAAAGTGACGTTGTAATCACGAATGTAGAAGATTATA
CAATGGCTTATTACAGCGGTATACAAAAAGGCGATATTGTAAAACGTATTAATAATAGCAATATAAATCCAAATGAAATA
AAAATGAATAAACTGAAAAATGTGAGCTCAATGATTGTGGAGAGAGATGGCAAGAATGTTGAGCTTAAGCTGACTTTATT
AAATGATAAGAATTTTTCTACCTATTTAATACCATTAATATTTTATGCTGTTTGTTTATTTTGTTGTTTATTTATATTGA
AAATAAATGAATCAAAGAATTTACTATCGGCTTTAATATTAATCGTTTTTCTATTATCAGCCTCTATTGCATTTATAAGT
GCGGGAGGATCTACTAAGGGAGATTTACTTAGCAGATGTATGATGGTATTAACATTAATATCTGTGCCGCTTAACTATCT
TCTCTTTCTTTATCAATATTTTAAAGAGTTAGGCACTATATTATTTAGTAAAAAAGTTTTTATTTTGTATTTGATTCCTG
CAATAAATGTAGTATGTGAACTGTTTCGTTCTTATCTTTTTTTCAGAGATTATGTGCCTAAACTAAATCTACTTTCGTTT
TTTATTTTATTCATAATAGTAGGTATTTATTTCGTTCTTATTTTAATGAAAAATAAAGATACTGAACAAGCACATATTAT
AAAAATTCTTGCGATAATTAATATCTTTTCATTTTCGCCGTTCTTGTGTTTATATCTGATACCTTATGTTTTCTTAAATG
CGCATTATGTTTCTTCATTTTTATCTGCTTCATTTATGTTGCTTATACCATTTTCTTTGGTTTATCAATTTATGACAAAT
AAAATTTATAATATTGATTTTATTTTAAGCAGATTAAAATACTATGGTTTTTTAGCTCTAACTCCAACAATTATTCTAAT
TTCTACAATCGAGTTATTTCGTAGCCCGGAAAGTGATTATTATAATATTAAACTAACTTTGTTAATTTACATTATTATGC
TTGCAGTTTTTTATTATAAAGAAGTGCTGGATTTTAGGTTTAGATTAAAAAGGGTCTCTGAAAAGTTTAATTATCAAGAC
AGTGTATATAAATTTACACAACTAATTAGAGACTCATCTTCTGTAACGCAGGTATTTGGAGAACTAAAAACTACCATTCT
TGAGGTTTTACTTGTAAGCCGAGCCCATATATATGAAGTTACATTTGATGGGAATATAAAACCATACGAGGAAGTAAACT
TACATTCATATCATGATATCTATCAAAAACAATTTAGTAAAGTAATATCTGAAATTGGGAAAATCGTTGAATTTAATAAC
GGTTTTGTCATGAAGATAGGTGAGCGCGGTGGTAAATCATTTGTTATACTTTGCTTATCTAAAATGAATACTCCCCGTCT
CACGCTTGAAGAAATTTCTTGGCTTAAAACATTGGCTTTTTATACAAATGTCTCGATTGAAAACGTCATGAAAATTGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCAAACCCAGTCTGGCTCAAAAAACTGATGTACACTATCGAA
GAAAAACAACGATCCGACCTGGCACGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCCTTAAAACGGCAATGCGA
GCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGCAAATGAATCAGCAGA
TGTCTGATGTGATTTTGATGACGAGGGAGACGTGCCATGAATTGCGGCCGCAGCTCTTGTATGATTTGGGATTGGTAAAG
GCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGGAAGGTTTACGGCATC
GCTCGATCTGGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGAAGCATTCCCAAGCCA
GCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATCGTTCTTCATTATGAGGATGACGGCGTTGGCTTTGATAAG
GAAAAATTGAATGAACAATCGATGAGTATGGGGCTTTCAGGCATTAAAGAGCGGGTTCGTGCGTTAGACGGGCATCTTCG
GATCGATACAAGCGTAGGAAATGGATTGCGAGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.829

100

0.564


Multiple sequence alignment