Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QUE89_RS16500 Genome accession   NZ_AP028070
Coordinates   3579105..3579497 (+) Length   130 a.a.
NCBI ID   WP_041342172.1    Uniprot ID   -
Organism   Marinobacter sp. LA51     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3574105..3584497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUE89_RS16470 - 3574329..3575342 (-) 1014 WP_286221114.1 aspartate carbamoyltransferase catalytic subunit -
  QUE89_RS16475 pyrR 3575402..3575911 (-) 510 WP_203299369.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  QUE89_RS16480 ruvX 3575944..3576387 (-) 444 WP_286221115.1 Holliday junction resolvase RuvX -
  QUE89_RS16485 - 3576380..3576946 (-) 567 WP_203299367.1 YqgE/AlgH family protein -
  QUE89_RS16490 - 3576943..3577809 (-) 867 WP_286221116.1 energy transducer TonB -
  QUE89_RS16495 gshB 3577848..3578810 (-) 963 WP_286221117.1 glutathione synthase -
  QUE89_RS16500 pilG 3579105..3579497 (+) 393 WP_041342172.1 twitching motility response regulator PilG Regulator
  QUE89_RS16505 pilH 3579530..3579892 (+) 363 WP_041342169.1 twitching motility response regulator PilH -
  QUE89_RS16510 - 3579913..3580458 (+) 546 WP_203299363.1 chemotaxis protein CheW -
  QUE89_RS16515 - 3580550..3582625 (+) 2076 WP_286221118.1 methyl-accepting chemotaxis protein -
  QUE89_RS16520 - 3582653..3583552 (+) 900 WP_286221119.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14551.85 Da        Isoelectric Point: 6.3282

>NTDB_id=103572 QUE89_RS16500 WP_041342172.1 3579105..3579497(+) (pilG) [Marinobacter sp. LA51]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYIPQAAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=103572 QUE89_RS16500 WP_041342172.1 3579105..3579497(+) (pilG) [Marinobacter sp. LA51]
ATGGATGACAACTTCGAGAATTTGAAGATCATGGTGATCGACGACAGCAAAACCATTCGTCGCACCGCAGAAACCCTTCT
GAAAAAAGTCGGCTGTGAGGTGATCACCGCAACTGACGGCTTTGACGCTCTGGCCAAAATTGCCGATTCCCAGCCGGACA
TCATCTTTGTCGATATCATGATGCCGCGACTGGATGGCTACCAGACCTGCGCACTTATCAAGAACAATTCCTCCTTTAAA
AAGACGCCGGTTATTATGCTCTCCAGCAAGGACGGCCTGTTCGACAAGGCAAAGGGCCGCATCGTCGGCTCTGACCAATA
CCTGACCAAACCGTTCAGCAAGGACGAGCTGCTCAATACTATCCGCCAATATATCCCCCAGGCGGCACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

96.154

0.746
  vicR Streptococcus mutans UA159

42.735

90

0.385
  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment