Detailed information NTG1035542

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: AB3239_RS13785
• Genome accession: NZ_CP166831
• Coordinates: 2640582..2641199 (-)
• Length: 205 a.a.
• NCBI ID: WP_032726193.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TE3T-UV25
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2635582..2646199

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3239_RS13755 (AB3239_13755)	rpsT	2635883..2636149 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
AB3239_RS13760 (AB3239_13760)	holA	2636164..2637207 (-)	1044	WP_029317888.1	DNA polymerase III subunit delta	-
AB3239_RS13765 (AB3239_13765)	-	2637247..2637360 (-)	114	WP_122060479.1	hypothetical protein	-
AB3239_RS13770 (AB3239_13770)	yqzM	2637437..2637571 (+)	135	WP_003229983.1	YqzM family protein	-
AB3239_RS13775 (AB3239_13775)	comEC	2637612..2639942 (-)	2331	WP_128441738.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB3239_RS13780 (AB3239_13780)	comEB	2639946..2640515 (-)	570	WP_003229978.1	ComE operon protein 2	-
AB3239_RS13785 (AB3239_13785)	comEA	2640582..2641199 (-)	618	WP_032726193.1	competence protein ComEA	Machinery gene
AB3239_RS13790 (AB3239_13790)	comER	2641283..2642104 (+)	822	WP_032726195.1	late competence protein ComER	-
AB3239_RS13795 (AB3239_13795)	yqeM	2642170..2642913 (-)	744	WP_032726197.1	class I SAM-dependent methyltransferase	-
AB3239_RS13800 (AB3239_13800)	rsfS	2642910..2643266 (-)	357	WP_014477391.1	ribosome silencing factor	-
AB3239_RS13805 (AB3239_13805)	yqeK	2643284..2643844 (-)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB3239_RS13810 (AB3239_13810)	nadD	2643834..2644403 (-)	570	WP_021480066.1	nicotinate-nucleotide adenylyltransferase	-
AB3239_RS13815 (AB3239_13815)	yhbY	2644415..2644705 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
AB3239_RS13820 (AB3239_13820)	aroE	2644699..2645541 (-)	843	WP_014480317.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21753.50 Da
• Isoelectric Point: 4.8417

>NTDB_id=1035542 AB3239_RS13785 WP_032726193.1 2640582..2641199(-) (comEA) [Bacillus subtilis strain TE3T-UV25]
MNWLNQHKKAIVLAASAAVFTAIMIFLATGKNKEPVKQAVPTEAENTVVKQEANNDESSETIVIDIKGAVQHPGVYEMRT
GDRVSQAIEKAGGTKEQADEAQVNLAEILQDGTVVYIPKKGEETAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEEITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=1035542 AB3239_RS13785 WP_032726193.1 2640582..2641199(-) (comEA) [Bacillus subtilis strain TE3T-UV25]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTGTTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGGCAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAGCGAAACAATTGTGATAGACATCAAAGGTGCTGTTCAGCATCCAGGCGTTTATGAAATGCGTACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCAGGCGGGACCAAAGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTCTGCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAAACAGCAGTGCAGCAAGGTGGCGGAGGGTCTG
TCCAAAGCGATGGAGGGAAGGGAGCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAAGAAAACGGGCGTTTCCAAACAATTGAAGAAATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (63-118)

• Helix-hairpin-helix motif (HHH_3) (142-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	97.561	100	0.976
comEA	Staphylococcus aureus MW2	35.909	100	0.385
comEA	Staphylococcus aureus N315	35	100	0.376