Detailed information NTG1035540

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AB3239_RS13775
• Genome accession: NZ_CP166831
• Coordinates: 2637612..2639942 (-)
• Length: 776 a.a.
• NCBI ID: WP_128441738.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TE3T-UV25
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2632612..2644942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3239_RS13740 (AB3239_13740)	yqxA	2632950..2633288 (-)	339	WP_124048123.1	YqxA family protein	-
AB3239_RS13745 (AB3239_13745)	spoIIP	2633305..2634510 (-)	1206	WP_014477383.1	spore autolysin SpoIIP	-
AB3239_RS13750 (AB3239_13750)	gpr	2634573..2635679 (-)	1107	WP_014480309.1	GPR endopeptidase	-
AB3239_RS13755 (AB3239_13755)	rpsT	2635883..2636149 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
AB3239_RS13760 (AB3239_13760)	holA	2636164..2637207 (-)	1044	WP_029317888.1	DNA polymerase III subunit delta	-
AB3239_RS13765 (AB3239_13765)	-	2637247..2637360 (-)	114	WP_122060479.1	hypothetical protein	-
AB3239_RS13770 (AB3239_13770)	yqzM	2637437..2637571 (+)	135	WP_003229983.1	YqzM family protein	-
AB3239_RS13775 (AB3239_13775)	comEC	2637612..2639942 (-)	2331	WP_128441738.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB3239_RS13780 (AB3239_13780)	comEB	2639946..2640515 (-)	570	WP_003229978.1	ComE operon protein 2	-
AB3239_RS13785 (AB3239_13785)	comEA	2640582..2641199 (-)	618	WP_032726193.1	competence protein ComEA	Machinery gene
AB3239_RS13790 (AB3239_13790)	comER	2641283..2642104 (+)	822	WP_032726195.1	late competence protein ComER	-
AB3239_RS13795 (AB3239_13795)	yqeM	2642170..2642913 (-)	744	WP_032726197.1	class I SAM-dependent methyltransferase	-
AB3239_RS13800 (AB3239_13800)	rsfS	2642910..2643266 (-)	357	WP_014477391.1	ribosome silencing factor	-
AB3239_RS13805 (AB3239_13805)	yqeK	2643284..2643844 (-)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB3239_RS13810 (AB3239_13810)	nadD	2643834..2644403 (-)	570	WP_021480066.1	nicotinate-nucleotide adenylyltransferase	-
AB3239_RS13815 (AB3239_13815)	yhbY	2644415..2644705 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86676.26 Da
• Isoelectric Point: 7.0688

>NTDB_id=1035540 AB3239_RS13775 WP_128441738.1 2637612..2639942(-) (comEC) [Bacillus subtilis strain TE3T-UV25]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIMLIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVETPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIIIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMAGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSVSFGRLFFSWFDLLISWTNRLITNIADVEVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEILLKHHKVKRLVIPKGFVSEPKDEKVLQAAREEGVAIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=1035540 AB3239_RS13775 WP_128441738.1 2637612..2639942(-) (comEC) [Bacillus subtilis strain TE3T-UV25]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATGTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTGAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGTGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATAATCCGTCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGGCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGTTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGACGTTGAAGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGAGGC
ATTTGCTGCACGGTGATGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAGCAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGATTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGGCAGCCAGGGAAG
AGGGAGTGGCAATTGAAGAGGTGAAGCGAGGCGATGTGTTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCGGAA
GCACCTGATCCGGCAAGCAAAAATAATTCATCTCTCGTTCTTTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAAGAGGTGATGAACGTGTTTCCGAATATAAAAGCAGATGTGTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGACCAAAA
CGGAACGATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Domain of unknown function (DUF4131) (DUF4131) (19-170)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	98.711	100	0.987