Detailed information NTG0103552

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: STAB904_RS08405
• Genome accession: NZ_CP007241
• Coordinates: 1728104..1728700 (-)
• Length: 198 a.a.
• NCBI ID: WP_038434336.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain 1E1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1723104..1733700

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STAB904_RS08385 (STAB904_09420)	spx	1724280..1724678 (-)	399	WP_002982188.1	transcriptional regulator Spx	-
STAB904_RS08390 (STAB904_09425)	recA	1724969..1726105 (-)	1137	WP_002992179.1	recombinase RecA	Machinery gene
STAB904_RS08395 (STAB904_09430)	cinA	1726194..1727465 (-)	1272	WP_038434334.1	competence/damage-inducible protein A	Machinery gene
STAB904_RS08400 (STAB904_09435)	-	1727534..1728094 (-)	561	WP_023611248.1	DNA-3-methyladenine glycosylase I	-
STAB904_RS08405 (STAB904_09440)	ruvA	1728104..1728700 (-)	597	WP_038434336.1	Holliday junction branch migration protein RuvA	Machinery gene
STAB904_RS08410 (STAB904_09445)	-	1728702..1729922 (-)	1221	WP_038434337.1	MDR family MFS transporter	-
STAB904_RS08415 (STAB904_09450)	hexB	1729933..1731915 (-)	1983	WP_038434338.1	DNA mismatch repair endonuclease MutL	Machinery gene

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21834.16 Da
• Isoelectric Point: 6.4948

>NTDB_id=103552 STAB904_RS08405 WP_038434336.1 1728104..1728700(-) (ruvA) [Streptococcus pyogenes strain 1E1]
MYDYIKGQLTKITAKYIVVETNGLGYIINVANPYSFTDSVNQLVTIYLHQVIREDAHLLFGFHTEDEKDVFLKLISVSGI
GPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFVEAPQETGHTKARSNKAGNTQLDEAIEAL
LALGYKAAELKKIRAFFEGTSETAEQYIKSALKLLMKG

Nucleotide

• Length: 597 bp

>NTDB_id=103552 STAB904_RS08405 WP_038434336.1 1728104..1728700(-) (ruvA) [Streptococcus pyogenes strain 1E1]
ATGTACGATTATATTAAAGGTCAATTGACCAAAATTACGGCAAAATACATTGTCGTTGAAACAAATGGACTAGGCTATAT
TATCAATGTAGCCAATCCTTATAGCTTTACAGATAGTGTCAACCAACTGGTAACTATTTACCTGCATCAAGTGATTCGTG
AGGATGCTCACTTGTTGTTTGGGTTTCATACGGAAGACGAAAAAGATGTTTTTCTGAAATTAATTTCTGTATCTGGCATT
GGCCCCACAACAGCTCTTGCTATTGTGGCAGTTGATGATAATGAGGGACTTGTGAATGCCATTGATAACAGTGACATTAA
GTACCTAATGAAATTTCCTAAAATTGGTAAAAAAACAGCGCAGCAAATGGTTCTTGACTTAGCTGGCAAATTTGTGGAGG
CTCCACAAGAGACTGGTCATACCAAAGCGCGCAGCAATAAAGCAGGCAATACTCAACTGGACGAAGCGATTGAAGCCCTC
CTTGCCCTCGGTTATAAGGCAGCGGAATTGAAGAAAATTCGTGCCTTCTTTGAAGGAACCTCTGAAACGGCCGAACAATA
CATCAAATCAGCCCTTAAACTATTAATGAAAGGCTAG

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (71-127)

• RuvA N terminal domain (RuvA_N) (1-61)

• RuvA, C-terminal domain (RuvA_C) (152-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	67.005	99.495	0.667
ruvA	Streptococcus pneumoniae R6	67.005	99.495	0.667
ruvA	Streptococcus pneumoniae D39	67.005	99.495	0.667
ruvA	Bacillus subtilis subsp. subtilis str. 168	40.394	100	0.414