Detailed information NTG1035265

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: PCA50_RS10625
• Genome accession: NZ_CP166770
• Coordinates: 2215142..2215843 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB191
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2210142..2220843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCA50_RS10595 (PCA50_010595)	-	2210448..2210891 (-)	444	WP_001246675.1	SRPBCC family protein	-
PCA50_RS10600 (PCA50_010600)	tadA	2210961..2211464 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
PCA50_RS10605 (PCA50_010605)	-	2211471..2212595 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
PCA50_RS10610 (PCA50_010610)	ung	2212592..2213305 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
PCA50_RS10615 (PCA50_010615)	-	2213356..2213952 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
PCA50_RS10620 (PCA50_010620)	gspK	2214183..2215142 (-)	960	WP_243477423.1	type II secretion system minor pseudopilin GspK	-
PCA50_RS10625 (PCA50_010625)	xcpW	2215142..2215843 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
PCA50_RS10630 (PCA50_010630)	xcpV	2215843..2216223 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
PCA50_RS10635 (PCA50_010635)	-	2216213..2216767 (-)	555	WP_000841373.1	type II secretion system protein	-
PCA50_RS10640 (PCA50_010640)	-	2216777..2217385 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
PCA50_RS10645 (PCA50_010645)	-	2217423..2218196 (-)	774	WP_000497298.1	TatD family hydrolase	-
PCA50_RS10650 (PCA50_010650)	-	2218214..2218555 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
PCA50_RS10655 (PCA50_010655)	-	2218567..2219547 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
PCA50_RS10660 (PCA50_010660)	kdsB	2219559..2220320 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1035265 PCA50_RS10625 WP_000594589.1 2215142..2215843(-) (xcpW) [Acinetobacter baumannii strain AB191]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1035265 PCA50_RS10625 WP_000594589.1 2215142..2215843(-) (xcpW) [Acinetobacter baumannii strain AB191]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996