Detailed information NTG1033231

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB8O67_RS18920
• Genome accession: NZ_CP166053
• Coordinates: 3629125..3630282 (-)
• Length: 385 a.a.
• NCBI ID: WP_044159475.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XYK2-4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3624125..3635282

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8O67_RS18890 (AB8O67_18885)	-	3624378..3624797 (-)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
AB8O67_RS18895 (AB8O67_18890)	comFC	3624871..3625593 (-)	723	WP_193659778.1	phosphoribosyltransferase family protein	Machinery gene
AB8O67_RS18900 (AB8O67_18895)	-	3625557..3625853 (-)	297	WP_059353628.1	late competence development ComFB family protein	-
AB8O67_RS18905 (AB8O67_18900)	comFA	3625910..3627304 (-)	1395	WP_326139353.1	ATP-dependent helicase ComFA	Machinery gene
AB8O67_RS18910 (AB8O67_18905)	-	3627411..3628256 (-)	846	WP_044159470.1	DegV family protein	-
AB8O67_RS18915 (AB8O67_18910)	degU	3628353..3629042 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB8O67_RS18920 (AB8O67_18915)	degS	3629125..3630282 (-)	1158	WP_044159475.1	two-component sensor histidine kinase DegS	Regulator
AB8O67_RS18925 (AB8O67_18920)	-	3630499..3631152 (+)	654	WP_044159478.1	YigZ family protein	-
AB8O67_RS18930 (AB8O67_18925)	-	3631152..3632276 (+)	1125	WP_326139352.1	LCP family protein	-
AB8O67_RS18935 (AB8O67_18930)	-	3632348..3633424 (-)	1077	WP_044159481.1	glycosyltransferase family 4 protein	-
AB8O67_RS18940 (AB8O67_18935)	-	3633568..3634758 (-)	1191	WP_193660667.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44844.64 Da
• Isoelectric Point: 6.5297

>NTDB_id=1033231 AB8O67_RS18920 WP_044159475.1 3629125..3630282(-) (degS) [Bacillus halotolerans strain XYK2-4]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKETKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=1033231 AB8O67_RS18920 WP_044159475.1 3629125..3630282(-) (degS) [Bacillus halotolerans strain XYK2-4]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGACTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGCCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAAGTCGAACTGACAATGAT
CCAGCAGCGTGAAAAGCAATTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGTTAGGCCTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTGCTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCCGATGCGCAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCACGACGGCCCTGCACAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATTGAACGGATTTTCCGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGCCAAAATGTGCGGAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGACGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATGACTATAGATTCAAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	98.961	100	0.99