Detailed information NTG1033228

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AB8O67_RS18895
• Genome accession: NZ_CP166053
• Coordinates: 3624871..3625593 (-)
• Length: 240 a.a.
• NCBI ID: WP_193659778.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XYK2-4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3619871..3630593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8O67_RS18860 (AB8O67_18855)	fliW	3620013..3620444 (-)	432	WP_024123020.1	flagellar assembly protein FliW	-
AB8O67_RS18865 (AB8O67_18860)	-	3620465..3621040 (-)	576	WP_326139355.1	DUF6470 family protein	-
AB8O67_RS18870 (AB8O67_18865)	flgL	3621087..3621983 (-)	897	WP_106295418.1	flagellar hook-associated protein FlgL	-
AB8O67_RS18875 (AB8O67_18870)	flgK	3621993..3623516 (-)	1524	WP_326139354.1	flagellar hook-associated protein FlgK	-
AB8O67_RS18880 (AB8O67_18875)	flgN	3623535..3624017 (-)	483	WP_010332064.1	flagellar protein FlgN	-
AB8O67_RS18885 (AB8O67_18880)	flgM	3624032..3624298 (-)	267	WP_044159458.1	flagellar biosynthesis anti-sigma factor FlgM	-
AB8O67_RS18890 (AB8O67_18885)	-	3624378..3624797 (-)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
AB8O67_RS18895 (AB8O67_18890)	comFC	3624871..3625593 (-)	723	WP_193659778.1	phosphoribosyltransferase family protein	Machinery gene
AB8O67_RS18900 (AB8O67_18895)	-	3625557..3625853 (-)	297	WP_059353628.1	late competence development ComFB family protein	-
AB8O67_RS18905 (AB8O67_18900)	comFA	3625910..3627304 (-)	1395	WP_326139353.1	ATP-dependent helicase ComFA	Machinery gene
AB8O67_RS18910 (AB8O67_18905)	-	3627411..3628256 (-)	846	WP_044159470.1	DegV family protein	-
AB8O67_RS18915 (AB8O67_18910)	degU	3628353..3629042 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB8O67_RS18920 (AB8O67_18915)	degS	3629125..3630282 (-)	1158	WP_044159475.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 27009.26 Da
• Isoelectric Point: 8.8457

>NTDB_id=1033228 AB8O67_RS18895 WP_193659778.1 3624871..3625593(-) (comFC) [Bacillus halotolerans strain XYK2-4]
MRNETGGGSKKLICLLCDSQFSQAVSWCSLFLLKPDDRVCQSCRNKLQIIKGAICPLCGRPQTAHEVCTDCEAWKSRIDD
GLRLSQNRSVYLYNDMMKETLARMKFRGDAAIISAFKNAFSSEFSAVYPDKRLVLVPIPLSEERKAERGFNQSQMLAECL
NRPIINPLIRLNNEKQSKKKKTERLLSEHVFETKNSSVEGMDIVLIDDLYTTGATLHYAARCLLEKGKAGSVSSFTLVRS

Nucleotide

• Length: 723 bp

>NTDB_id=1033228 AB8O67_RS18895 WP_193659778.1 3624871..3625593(-) (comFC) [Bacillus halotolerans strain XYK2-4]
ATGCGAAACGAGACAGGAGGAGGCTCTAAAAAACTGATCTGTCTATTATGTGATTCACAATTTTCTCAAGCTGTTTCATG
GTGCTCACTATTCTTATTAAAACCTGACGACAGGGTCTGTCAGTCCTGCAGAAACAAATTACAGATCATCAAAGGGGCCA
TCTGTCCGCTTTGCGGCAGGCCTCAAACCGCTCATGAAGTGTGCACGGATTGCGAGGCATGGAAATCAAGAATAGATGAC
GGCTTAAGGCTCAGTCAAAACCGTTCTGTTTACTTATATAATGACATGATGAAAGAAACGCTCGCCCGAATGAAATTCAG
GGGAGATGCAGCAATAATAAGCGCTTTTAAAAATGCCTTTTCCTCAGAATTCTCTGCTGTCTATCCAGATAAACGCCTTG
TGCTCGTTCCCATTCCGTTAAGCGAAGAACGGAAAGCAGAACGCGGTTTTAACCAGTCACAAATGCTTGCTGAATGCTTA
AACCGGCCCATCATCAATCCTCTCATCCGCCTGAATAATGAAAAGCAGTCTAAAAAAAAGAAAACGGAGCGCCTGCTTTC
AGAGCATGTTTTTGAAACAAAAAACAGCTCGGTTGAGGGTATGGATATTGTTTTAATCGACGATCTTTATACTACGGGCG
CCACTTTGCACTATGCTGCCCGCTGTTTATTGGAGAAAGGCAAAGCTGGTTCAGTGTCATCTTTTACCTTAGTGAGAAGC
TAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (184-238)

• Double zinc ribbon domain (DZR_2) (14-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	75.833	100	0.758