Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB8W29_RS13975 | Genome accession | NZ_CP166016 |
| Coordinates | 2830577..2831119 (+) | Length | 180 a.a. |
| NCBI ID | WP_007675594.1 | Uniprot ID | K8ABX4 |
| Organism | Cronobacter condimenti strain LMG26250 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2825577..2836119
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB8W29_RS13960 (AB8W29_13990) | - | 2826554..2826898 (-) | 345 | WP_007675589.1 | hypothetical protein | - |
| AB8W29_RS13965 (AB8W29_13995) | - | 2826910..2827311 (-) | 402 | WP_007675592.1 | hypothetical protein | - |
| AB8W29_RS13970 (AB8W29_14000) | uvrA | 2827521..2830346 (-) | 2826 | WP_053532062.1 | excinuclease ABC subunit UvrA | - |
| AB8W29_RS13975 (AB8W29_14005) | ssb | 2830577..2831119 (+) | 543 | WP_007675594.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| AB8W29_RS13980 (AB8W29_14010) | - | 2831530..2832576 (+) | 1047 | WP_007675596.1 | diguanylate cyclase | - |
| AB8W29_RS13985 (AB8W29_14015) | - | 2832752..2833096 (+) | 345 | WP_032984558.1 | hypothetical protein | - |
| AB8W29_RS13990 (AB8W29_14020) | - | 2833159..2833437 (-) | 279 | WP_007675600.1 | YjcB family protein | - |
| AB8W29_RS13995 (AB8W29_14025) | - | 2834014..2835621 (+) | 1608 | WP_144420972.1 | EAL domain-containing protein | - |
| AB8W29_RS14000 (AB8W29_14030) | soxS | 2835609..2835932 (-) | 324 | WP_007675612.1 | superoxide response transcriptional regulator SoxS | - |
Sequence
Protein
Download Length: 180 a.a. Molecular weight: 19321.36 Da Isoelectric Point: 5.2358
>NTDB_id=1033007 AB8W29_RS13975 WP_007675594.1 2830577..2831119(+) (ssb) [Cronobacter condimenti strain LMG26250]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANLRLATSESWRDKQTGEMKEVTEWHSVVLYGKLAEVAGEYLRKGSQIYI
EGQLRTRKWQDQSGQDRYSTEVVVNVGGTMQMLGGRQGGGAPAGGNMGGGQQQGGWGQPQQPQQQSGGAQFSGGAQSRPQ
QQAPAPSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANLRLATSESWRDKQTGEMKEVTEWHSVVLYGKLAEVAGEYLRKGSQIYI
EGQLRTRKWQDQSGQDRYSTEVVVNVGGTMQMLGGRQGGGAPAGGNMGGGQQQGGWGQPQQPQQQSGGAQFSGGAQSRPQ
QQAPAPSNEPPMDFDDDIPF
Nucleotide
Download Length: 543 bp
>NTDB_id=1033007 AB8W29_RS13975 WP_007675594.1 2830577..2831119(+) (ssb) [Cronobacter condimenti strain LMG26250]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGGCAGGACCCGGAAGTACGCTACATGCCGAATGG
CGGGGCCGTTGCGAACCTGCGCCTGGCGACGTCCGAATCCTGGCGCGACAAGCAGACCGGCGAGATGAAAGAAGTGACCG
AATGGCACAGCGTTGTGCTGTACGGCAAGCTGGCGGAAGTCGCGGGTGAATATCTGCGTAAAGGTTCGCAGATCTACATC
GAAGGTCAGTTGCGTACCCGTAAATGGCAGGATCAGAGCGGTCAGGATCGCTATTCGACCGAAGTTGTCGTTAATGTCGG
CGGTACCATGCAGATGCTGGGTGGCCGTCAGGGCGGCGGCGCACCGGCCGGTGGCAACATGGGCGGCGGTCAGCAGCAGG
GCGGTTGGGGTCAGCCTCAGCAACCTCAGCAGCAGAGTGGCGGCGCGCAGTTCAGCGGCGGCGCACAATCCCGTCCGCAG
CAGCAGGCGCCGGCACCGTCTAACGAACCGCCGATGGATTTCGACGACGATATCCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGGCAGGACCCGGAAGTACGCTACATGCCGAATGG
CGGGGCCGTTGCGAACCTGCGCCTGGCGACGTCCGAATCCTGGCGCGACAAGCAGACCGGCGAGATGAAAGAAGTGACCG
AATGGCACAGCGTTGTGCTGTACGGCAAGCTGGCGGAAGTCGCGGGTGAATATCTGCGTAAAGGTTCGCAGATCTACATC
GAAGGTCAGTTGCGTACCCGTAAATGGCAGGATCAGAGCGGTCAGGATCGCTATTCGACCGAAGTTGTCGTTAATGTCGG
CGGTACCATGCAGATGCTGGGTGGCCGTCAGGGCGGCGGCGCACCGGCCGGTGGCAACATGGGCGGCGGTCAGCAGCAGG
GCGGTTGGGGTCAGCCTCAGCAACCTCAGCAGCAGAGTGGCGGCGCGCAGTTCAGCGGCGGCGCACAATCCCGTCCGCAG
CAGCAGGCGCCGGCACCGTCTAACGAACCGCCGATGGATTTCGACGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
74.725 |
100 |
0.756 |
| ssb | Glaesserella parasuis strain SC1401 |
57.219 |
100 |
0.594 |
| ssb | Neisseria meningitidis MC58 |
48.087 |
100 |
0.489 |
| ssb | Neisseria gonorrhoeae MS11 |
48.087 |
100 |
0.489 |