Detailed information NTG1031739

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: AB7T04_RS11605
• Genome accession: NZ_CP165780
• Coordinates: 2402768..2403838 (-)
• Length: 356 a.a.
• NCBI ID: WP_003153083.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain L-15
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2397768..2408838

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB7T04_RS11555 (AB7T04_11555)	sipW	2397828..2398412 (-)	585	WP_060562614.1	signal peptidase I SipW	-
AB7T04_RS11560 (AB7T04_11560)	tapA	2398384..2399055 (-)	672	WP_071391613.1	amyloid fiber anchoring/assembly protein TapA	-
AB7T04_RS11565 (AB7T04_11565)	-	2399314..2399643 (+)	330	WP_071391612.1	DUF3889 domain-containing protein	-
AB7T04_RS11570 (AB7T04_11570)	-	2399683..2399862 (-)	180	WP_003153093.1	YqzE family protein	-
AB7T04_RS11575 (AB7T04_11575)	comGG	2399919..2400296 (-)	378	WP_071391611.1	competence type IV pilus minor pilin ComGG	Machinery gene
AB7T04_RS11580 (AB7T04_11580)	comGF	2400297..2400797 (-)	501	WP_230014462.1	competence type IV pilus minor pilin ComGF	-
AB7T04_RS11585 (AB7T04_11585)	comGE	2400706..2401020 (-)	315	WP_015388003.1	competence type IV pilus minor pilin ComGE	Machinery gene
AB7T04_RS11590 (AB7T04_11590)	comGD	2401004..2401441 (-)	438	WP_025852922.1	competence type IV pilus minor pilin ComGD	Machinery gene
AB7T04_RS11595 (AB7T04_11595)	comGC	2401431..2401739 (-)	309	WP_003153087.1	competence type IV pilus major pilin ComGC	Machinery gene
AB7T04_RS11600 (AB7T04_11600)	comGB	2401744..2402781 (-)	1038	WP_063174751.1	competence type IV pilus assembly protein ComGB	Machinery gene
AB7T04_RS11605 (AB7T04_11605)	comGA	2402768..2403838 (-)	1071	WP_003153083.1	competence type IV pilus ATPase ComGA	Machinery gene
AB7T04_RS11610 (AB7T04_11610)	-	2404030..2404980 (-)	951	WP_071391609.1	magnesium transporter CorA family protein	-
AB7T04_RS11615 (AB7T04_11615)	-	2405127..2406428 (+)	1302	WP_166706141.1	hemolysin family protein	-
AB7T04_RS11620 (AB7T04_11620)	-	2406466..2407296 (-)	831	WP_071391608.1	STAS domain-containing protein	-
AB7T04_RS11630 (AB7T04_11630)	-	2407501..2407881 (-)	381	WP_003153079.1	Spx/MgsR family RNA polymerase-binding regulatory protein	-
AB7T04_RS11635 (AB7T04_11635)	-	2408118..2408363 (+)	246	WP_003153078.1	DUF2626 domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 40529.85 Da
• Isoelectric Point: 9.4729

>NTDB_id=1031739 AB7T04_RS11605 WP_003153083.1 2402768..2403838(-) (comGA) [Bacillus velezensis strain L-15]
MKNIETYSRNIINEAYTARASDIHIVPREKDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD

Nucleotide

• Length: 1071 bp

>NTDB_id=1031739 AB7T04_RS11605 WP_003153083.1 2402768..2403838(-) (comGA) [Bacillus velezensis strain L-15]
GTGAAAAATATTGAAACATACAGCAGGAACATCATAAACGAGGCCTATACGGCAAGGGCTTCAGATATACACATTGTGCC
GAGAGAAAAGGATGCTTTCATTCATTTTCGCATCGGGCATGCTCTTGTGAAAAAAAGAGTCTTAAAAAAAGAGGAATGCG
TAAGGCTTATTTCTCATTTCAAGTTTTTATCGGCCATGGATATAGGAGAAAGACGTAAGCCGCAAAACGGGTCATTGTCT
CTGCCGCTTCCGACGGAAACCGTTCATTTGAGAATGTCAACCTTGCCGACAATGAATGATGAAAGTCTTGTCATCAGGCT
TTTGCCTAAGCGGCAGATTCCCCCTCTGGATAAACTGTCTTTATTTCGGGGGGCGGGCGCCGCACTATTGTCCTTTCTGA
AGCATTCGCACGGCCTGCTTCTGTTTACCGGACCGACCGGATCTGGAAAAACGACCACCCTTTACTCGCTTGTCAACTAT
GCAAAAAGGCATTTCAACCGGCGGATTGTCACGCTTGAAGATCCCGTAGAAACAAGAGATGAGGATGTGTTGCAAGTTCA
GGTGAATGAAAAAGCCGGAGTCACATATTCCGCCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATGATCATCTTAG
GTGAAATCAGGGATGCCGAGACGGCTGAAATCGCAGTCCGCGCGGCCATGACGGGACACCTCGTTCTTTCAAGCCTGCAC
ACAAGGGATGCTAAGGGTGCCATATACAGACTGTTGGAGTTTGGGGTGAACATGACAGAAATTGAACAAACCGTCATTGC
CATTGCCGCTCAGCGTCTGGTTGATTTAACATGTCCGTTCTGCAAAGAGGAAAACTGTTCGGTGTACTGCCGGATGTACA
GGCAGACACGCCGTGCGGGCATTTATGAACTGCTCTACGGGAAAAACCTTACCCAATGCTTTCAGGAAGCAAAGGGAGAG
CACGCCAATTTTCAATATCAGACGCTCCGCAGGCTGATCAGAAAAGGAATCGCGCTCGGCTATGTCACGACCGACAATTA
CGATCGGTGGGTGTATCATGAAGCGGATTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (10-275)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Bacillus subtilis subsp. subtilis str. 168	82.022	100	0.82
pilB	Glaesserella parasuis strain SC1401	38.793	97.753	0.379
pilF	Thermus thermophilus HB27	37.892	98.596	0.374