Detailed information NTG1030760

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AB7I05_RS03700
• Genome accession: NZ_CP165604
• Coordinates: 726232..726924 (+)
• Length: 230 a.a.
• NCBI ID: WP_005694370.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain Rd-KW20
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 721232..731924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB7I05_RS03680 (AB7I05_03680)	ampD	722508..723062 (-)	555	WP_005694366.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
AB7I05_RS03685 (AB7I05_03685)	pilA	723178..723627 (+)	450	WP_005694367.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
AB7I05_RS03690 (AB7I05_03690)	pilB	723624..725018 (+)	1395	WP_005694368.1	GspE/PulE family protein	Machinery gene
AB7I05_RS03695 (AB7I05_03695)	pilC	725015..726235 (+)	1221	WP_005694369.1	type II secretion system F family protein	Machinery gene
AB7I05_RS03700 (AB7I05_03700)	pilD	726232..726924 (+)	693	WP_005694370.1	A24 family peptidase	Machinery gene
AB7I05_RS03705 (AB7I05_03705)	rho	726978..728240 (-)	1263	WP_005648966.1	transcription termination factor Rho	-
AB7I05_RS03710 (AB7I05_03710)	metJ	728487..728804 (+)	318	WP_005631186.1	met regulon transcriptional regulator MetJ	-
AB7I05_RS03715 (AB7I05_03715)	cueR	728818..729204 (-)	387	WP_005654127.1	Cu(I)-responsive transcriptional regulator	-
AB7I05_RS03720 (AB7I05_03720)	-	729281..729487 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-
AB7I05_RS03725 (AB7I05_03725)	-	729562..729768 (+)	207	WP_005656255.1	heavy-metal-associated domain-containing protein	-
AB7I05_RS03730 (AB7I05_03730)	-	729842..730048 (+)	207	WP_005656255.1	heavy-metal-associated domain-containing protein	-
AB7I05_RS03735 (AB7I05_03735)	-	730123..730329 (+)	207	WP_005656255.1	heavy-metal-associated domain-containing protein	-
AB7I05_RS03740 (AB7I05_03740)	-	730404..730610 (+)	207	WP_005656255.1	heavy-metal-associated domain-containing protein	-
AB7I05_RS03745 (AB7I05_03745)	-	730684..730890 (+)	207	WP_005656255.1	heavy-metal-associated domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 26788.82 Da
• Isoelectric Point: 9.2892

>NTDB_id=1030760 AB7I05_RS03700 WP_005694370.1 726232..726924(+) (pilD) [Haemophilus influenzae strain Rd-KW20]
MIYFTMFLLGGILGIALWFYLSGFITRLQQNIYAIYVELFPQNRSPFQPHFASIQQKKCGHILRYFFSIGVGFIFLQIAF
KDSIFTVWIGLTLIILWTISYLDWHYQLISTTPCLWLLTLGLFGADNNFSLLTLSESIKSAASFFIVFYVIYWLAKFYYG
KEAFGRGDYWLAMALGSFIHLETLPHFLLLASVLGICFSLIHRKKKEFLPFAPFMNLSAVIIYFVKYYGY

Nucleotide

• Length: 693 bp

>NTDB_id=1030760 AB7I05_RS03700 WP_005694370.1 726232..726924(+) (pilD) [Haemophilus influenzae strain Rd-KW20]
ATGATTTATTTCACAATGTTTTTATTAGGCGGTATCTTAGGGATCGCATTGTGGTTCTACCTATCTGGTTTTATTACGCG
TTTGCAGCAAAATATTTATGCGATTTACGTTGAATTATTTCCACAAAACCGTTCTCCATTTCAACCGCACTTTGCCTCTA
TTCAACAAAAAAAGTGCGGTCATATTTTGAGGTATTTTTTTAGTATTGGGGTTGGATTTATATTTTTACAAATTGCCTTC
AAAGATTCTATTTTTACTGTATGGATCGGACTCACACTTATTATTCTTTGGACAATCAGTTATCTTGATTGGCACTATCA
ACTTATTTCTACGACACCCTGTTTATGGTTACTTACTCTAGGATTATTTGGAGCAGACAATAACTTTTCATTACTTACGT
TATCTGAAAGCATAAAAAGTGCGGCAAGTTTTTTTATTGTTTTCTACGTAATCTATTGGCTTGCAAAATTCTATTATGGA
AAAGAAGCCTTTGGACGGGGAGATTATTGGCTAGCAATGGCATTAGGAAGTTTTATTCATTTAGAAACCTTACCGCACTT
TTTATTATTAGCCTCAGTGCTTGGAATATGTTTTTCGCTTATTCATAGGAAGAAAAAAGAATTTTTACCTTTTGCCCCTT
TTATGAACTTATCAGCTGTCATCATTTATTTCGTCAAATATTACGGATATTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (92-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Haemophilus influenzae Rd KW20	100	100	1
pilD	Haemophilus influenzae 86-028NP	94.783	100	0.948