Detailed information NTG1030520

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AB5Z16_RS26420
• Genome accession: NZ_CP163544
• Coordinates: 5702729..5703793 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PAHT-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5697729..5708793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5Z16_RS26395 (AB5Z16_26395)	aroK	5698276..5698794 (-)	519	WP_003095833.1	shikimate kinase AroK	-
AB5Z16_RS26400 (AB5Z16_26400)	pilQ	5698806..5700938 (-)	2133	WP_003116137.1	type 4a pilus secretin PilQ	Machinery gene
AB5Z16_RS26405 (AB5Z16_26405)	pilP	5700992..5701516 (-)	525	WP_003116136.1	type 4a pilus biogenesis lipoprotein PilP	-
AB5Z16_RS26410 (AB5Z16_26410)	pilO	5701513..5702136 (-)	624	WP_003116135.1	type 4a pilus biogenesis protein PilO	-
AB5Z16_RS26415 (AB5Z16_26415)	pilN	5702133..5702729 (-)	597	WP_003116134.1	type 4a pilus biogenesis protein PilN	-
AB5Z16_RS26420 (AB5Z16_26420)	pilM	5702729..5703793 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
AB5Z16_RS26425 (AB5Z16_26425)	-	5703978..5706449 (+)	2472	WP_003095841.1	penicillin-binding protein 1A	-
AB5Z16_RS26430 (AB5Z16_26430)	-	5706554..5707822 (-)	1269	WP_004347579.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1030520 AB5Z16_RS26420 WP_003110888.1 5702729..5703793(-) (pilM) [Pseudomonas aeruginosa strain PAHT-1]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1030520 AB5Z16_RS26420 WP_003110888.1 5702729..5703793(-) (pilM) [Pseudomonas aeruginosa strain PAHT-1]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGACTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466