Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB4670_RS00975 | Genome accession | NZ_CP163382 |
| Coordinates | 220429..221010 (+) | Length | 193 a.a. |
| NCBI ID | WP_001215080.1 | Uniprot ID | A0A009T283 |
| Organism | Acinetobacter baumannii strain Y03 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 215429..226010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4670_RS00950 (AB4670_00950) | - | 216050..216403 (+) | 354 | WP_373658880.1 | DUF1304 domain-containing protein | - |
| AB4670_RS00955 (AB4670_00955) | - | 216456..216797 (+) | 342 | WP_000263329.1 | GlpM family protein | - |
| AB4670_RS00960 (AB4670_00960) | tenA | 216847..217521 (-) | 675 | WP_000899418.1 | thiaminase II | - |
| AB4670_RS00965 (AB4670_00965) | - | 217784..218866 (+) | 1083 | WP_000680213.1 | DUF475 domain-containing protein | - |
| AB4670_RS00970 (AB4670_00970) | - | 219013..220377 (+) | 1365 | WP_000980460.1 | MFS transporter | - |
| AB4670_RS00975 (AB4670_00975) | ssb | 220429..221010 (+) | 582 | WP_001215080.1 | single-stranded DNA-binding protein | Machinery gene |
| AB4670_RS00980 (AB4670_00980) | - | 221583..222758 (+) | 1176 | WP_227503230.1 | HlyD family secretion protein | - |
| AB4670_RS00985 (AB4670_00985) | - | 222760..224874 (+) | 2115 | WP_373658889.1 | peptidase domain-containing ABC transporter | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20978.80 Da Isoelectric Point: 6.4822
>NTDB_id=1029456 AB4670_RS00975 WP_001215080.1 220429..221010(+) (ssb) [Acinetobacter baumannii strain Y03]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=1029456 AB4670_RS00975 WP_001215080.1 220429..221010(+) (ssb) [Acinetobacter baumannii strain Y03]
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCGCAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCGCAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.5 |
100 |
0.534 |
| ssb | Vibrio cholerae strain A1552 |
43.564 |
100 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
38.579 |
100 |
0.394 |
| ssb | Neisseria gonorrhoeae MS11 |
38.579 |
100 |
0.394 |