Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | AB4L27_RS07640 | Genome accession | NZ_CP162907 |
| Coordinates | 1633952..1634596 (+) | Length | 214 a.a. |
| NCBI ID | WP_005397417.1 | Uniprot ID | A0AAQ2J3W0 |
| Organism | Vibrio diabolicus strain 3098 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1628952..1639596
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4L27_RS07625 (AB4L27_07625) | - | 1629429..1630874 (-) | 1446 | WP_104969848.1 | MSHA biogenesis protein MshI | - |
| AB4L27_RS07630 (AB4L27_07630) | csrD | 1630886..1632895 (-) | 2010 | WP_048626836.1 | RNase E specificity factor CsrD | - |
| AB4L27_RS07635 (AB4L27_07635) | ssb | 1633138..1633674 (-) | 537 | WP_012841367.1 | single-stranded DNA-binding protein | Machinery gene |
| AB4L27_RS07640 (AB4L27_07640) | qstR | 1633952..1634596 (+) | 645 | WP_005397417.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| AB4L27_RS07645 (AB4L27_07645) | galU | 1634755..1635627 (+) | 873 | WP_005397418.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| AB4L27_RS07650 (AB4L27_07650) | uvrA | 1635777..1638599 (+) | 2823 | WP_104969851.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24483.41 Da Isoelectric Point: 9.7165
>NTDB_id=1027972 AB4L27_RS07640 WP_005397417.1 1633952..1634596(+) (qstR) [Vibrio diabolicus strain 3098]
MRKSAYARKLFLISMEDNAQKKVAALEKYIDMSIPVISTEALMEAKPQHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLSFGQLKGLFYSEDTLEQIGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
MRKSAYARKLFLISMEDNAQKKVAALEKYIDMSIPVISTEALMEAKPQHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLSFGQLKGLFYSEDTLEQIGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
Nucleotide
Download Length: 645 bp
>NTDB_id=1027972 AB4L27_RS07640 WP_005397417.1 1633952..1634596(+) (qstR) [Vibrio diabolicus strain 3098]
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATCAGTATGGAAGATAATGCGCAAAAAAAGGTGGCGGCACTCGA
AAAGTACATTGATATGAGCATCCCGGTGATTTCGACCGAAGCACTCATGGAAGCTAAGCCACAGCATCGTAACAAAATCC
TACTGATCGACTTCAGTGAACATAAATCACTCGTTCAATCGATCAAAAACTTACCGCTGGTATGGAAGAACTTTGAAACC
GTTGTGTTCAATGTCCCTAAAAGGCTGACCACGGATGAGCTTCTTTCATTTGGTCAATTAAAGGGGCTGTTCTATTCCGA
AGATACGCTAGAGCAAATTGGAGAGGGATTAAAAGGCATTGTTAACGGTCAAAACTGGCTGCCGCGTAATGTAACCAGTC
AACTTTTACACTATTACCGTAACGTCATTAATACTCATACTGCCCCAGCCACGGTAGACCTAACCATTCGCGAGCTGCAA
GTACTGCGTTGCTTGCAAGCTGGCGCATCGAACAGCCAAATGGCCGAGGAATTATTTGTCAGTGAATTCACCATCAAATC
GCACTTGTATCAGATATTCAAAAAGCTATCAGTGAAGAATCGCGTTCAAGCAATCGCTTGGGCAGATCAAAACTTAATGT
CATGA
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATCAGTATGGAAGATAATGCGCAAAAAAAGGTGGCGGCACTCGA
AAAGTACATTGATATGAGCATCCCGGTGATTTCGACCGAAGCACTCATGGAAGCTAAGCCACAGCATCGTAACAAAATCC
TACTGATCGACTTCAGTGAACATAAATCACTCGTTCAATCGATCAAAAACTTACCGCTGGTATGGAAGAACTTTGAAACC
GTTGTGTTCAATGTCCCTAAAAGGCTGACCACGGATGAGCTTCTTTCATTTGGTCAATTAAAGGGGCTGTTCTATTCCGA
AGATACGCTAGAGCAAATTGGAGAGGGATTAAAAGGCATTGTTAACGGTCAAAACTGGCTGCCGCGTAATGTAACCAGTC
AACTTTTACACTATTACCGTAACGTCATTAATACTCATACTGCCCCAGCCACGGTAGACCTAACCATTCGCGAGCTGCAA
GTACTGCGTTGCTTGCAAGCTGGCGCATCGAACAGCCAAATGGCCGAGGAATTATTTGTCAGTGAATTCACCATCAAATC
GCACTTGTATCAGATATTCAAAAAGCTATCAGTGAAGAATCGCGTTCAAGCAATCGCTTGGGCAGATCAAAACTTAATGT
CATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
95.794 |
100 |
0.958 |
| qstR | Vibrio campbellii strain DS40M4 |
89.252 |
100 |
0.893 |
| qstR | Vibrio cholerae strain A1552 |
52.804 |
100 |
0.528 |