Detailed information NTG1027752

Bioinformatically predicted

Overview

• Name: pilY1
• Type: Machinery gene
• Locus tag: AB4073_RS02605
• Genome accession: NZ_CP162643
• Coordinates: 553647..557501 (+)
• Length: 1284 a.a.
• NCBI ID: WP_368678366.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae strain 128-92
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 548647..562501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4073_RS02575 (AB4073_02575)	gmk	548928..549557 (-)	630	WP_002116973.1	guanylate kinase	-
AB4073_RS02580 (AB4073_02580)	ispH	549680..550630 (+)	951	WP_016142896.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
AB4073_RS02585 (AB4073_02585)	fimU	550801..551274 (+)	474	WP_368678364.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
AB4073_RS02590 (AB4073_02590)	pilV	551268..551828 (+)	561	WP_079748555.1	type IV pilus modification protein PilV	Machinery gene
AB4073_RS02595 (AB4073_02595)	pilW	551828..552829 (+)	1002	WP_368678365.1	PilW family protein	Machinery gene
AB4073_RS02600 (AB4073_02600)	pilX	552826..553635 (+)	810	WP_081172672.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
AB4073_RS02605 (AB4073_02605)	pilY1	553647..557501 (+)	3855	WP_368678366.1	PilC/PilY family type IV pilus protein	Machinery gene
AB4073_RS02610 (AB4073_02610)	pilY2	557512..557994 (+)	483	WP_368678367.1	type IV pilin protein	Machinery gene
AB4073_RS02615 (AB4073_02615)	pilE	557991..558416 (+)	426	WP_368678368.1	type IV pilin protein	Machinery gene
AB4073_RS02620 (AB4073_02620)	rpsP	558564..558815 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
AB4073_RS02625 (AB4073_02625)	rimM	558835..559383 (+)	549	WP_002116736.1	ribosome maturation factor RimM	-
AB4073_RS02630 (AB4073_02630)	trmD	559426..560181 (+)	756	WP_368678369.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AB4073_RS02635 (AB4073_02635)	rplS	560401..560769 (+)	369	WP_002116654.1	50S ribosomal protein L19	-
AB4073_RS02640 (AB4073_02640)	-	560821..561762 (-)	942	WP_368678817.1	lipase family alpha/beta hydrolase	-

Sequence

Protein

• Length: 1284 a.a.
• Molecular weight: 138153.72 Da
• Isoelectric Point: 7.8725

>NTDB_id=1027752 AB4073_RS02605 WP_368678366.1 553647..557501(+) (pilY1) [Acinetobacter lactucae strain 128-92]
MKLKLKNFKPNNLWYAICSSSVAFTWLMTSSVVQASDLQIYASPTAGKKTIVMMLDTSGSMTNNSYGENRLALLKNGMNA
FLASNNPILNDTRVGLGNFSANGDSRSGQILVAAAPLGDASTLNTVGSQRYKLKQAVANLTAGGSTPSAHAYAEAAAYLM
GTTTYSEANYTIRKDSYVKRVRKSDNRTEYSYCTNYRDSQIDTTNLWQPCRSNNYWSNWSTSNPGVDTATAYDTSSDWTY
SYTYYYTTFNYAIANADSGIPKSKTNDTTSNPNIVVDRNASNLNAIYQSPLPTVANRQSCDGQGIYFLSDGEPNNTTNTR
SATVMSTALGSTLGANFTCSGGLSNTTADSGWACMGEFAKRLFDKTKNPAGVSIQTAFVGFGSDFSSLSSSDVKNACRLS
SRTQSDRKSDDNCSPNQTTNAVAAPGYGNGGFFPTQSAQGVTDSVIAFINNLDKVPLEPLTTGAISVPYDALNPKNLQEY
GYLRAFEPNPANTYLTWRGNLKKYHVVLSGTNAGAFEANTGGLVYNATGAFRTGTKDYWNSSTYNDGGKVFFGGSYAKVP
LPIAGQNETRDEEGNITKYYYAVQTKIRNLFTDVSAVASDGSLTKISTSGTNLLKIPATPPEGTNPFDSVANTASYILGK
FNASTGQDILKAFPISLKLKILNYLGYSTDISATTLPSSLVTSNEPYLSMGGSIHSLPVQLTYNGTLDENGNLTSAREQS
ILYGTMEGGLHIVDASTGVEQMAFVPADILNDPVASKALVVGQSDASAPAHGMDGAWVSDPAYSITTTGSGNSAVSKVTA
KQMNIYGGMRMGGSSYYGLNVLNPASPKLLFRVGADQTDYSRMGQSWSKPVLANIRYNGVIKRVMIVGGGYDQCYENPNI
TLSNSCFTNGKAKGNAVYIIDAKTGERLWWTSDTGSNIDNSNMKHSIVSRISTLDRDADGLIDHLYFGDLGGQVFRIDLN
NNQTKTNSTYSSFGIRVVRLANLATNDSTYDASNDYTAGNAPRFYEPPTVTIHDYGIRTFITVGIASGDRSTPLDVYPLT
GREGMSPSTALSGRPVNNVYGIIDKDFIKKNLMSLTDSQLETKDITRSMLRKNPQILRSGETRVAQIFFPNSGTGQNGWY
RSLSSMSDGTEKANNSFRIKGGLKAFEEPMAITGTLIVPVYDPQGTGIVAADPCLPRVVGETDQQTFCLPFGACLNSDGS
IDQNKENGSGFRTKTGTNCPVGASECNTNIIGSGIRGIAFVPKRDVPPVTNSCGKLQLSGNESGTGEWQCTSHLVPARWY
ERYR

Nucleotide

• Length: 3855 bp

>NTDB_id=1027752 AB4073_RS02605 WP_368678366.1 553647..557501(+) (pilY1) [Acinetobacter lactucae strain 128-92]
ATGAAACTAAAATTGAAGAATTTTAAGCCAAATAATTTATGGTATGCCATCTGTTCGAGTTCGGTTGCTTTTACATGGCT
AATGACAAGTTCTGTGGTGCAGGCGAGTGATTTACAAATTTATGCTTCACCTACAGCGGGTAAAAAAACCATTGTGATGA
TGTTGGATACATCAGGAAGTATGACCAACAATAGTTATGGTGAAAACCGTTTGGCCCTGCTTAAAAATGGTATGAATGCT
TTTTTAGCCAGCAATAATCCTATTTTAAATGATACTCGTGTGGGCTTGGGAAATTTCTCTGCCAATGGTGATAGCCGAAG
TGGACAAATTTTGGTAGCTGCTGCTCCTTTAGGAGATGCGAGTACTTTAAATACAGTAGGTTCTCAGCGTTATAAATTAA
AACAGGCTGTTGCAAATTTAACTGCTGGTGGGTCAACACCTTCAGCGCATGCTTATGCAGAAGCTGCTGCTTATTTGATG
GGTACAACAACCTATTCAGAGGCGAATTATACTATTCGAAAAGATAGCTATGTAAAGCGTGTGCGAAAATCTGATAATAG
AACGGAATACTCATATTGTACGAATTATCGCGATTCACAAATCGATACTACAAATCTATGGCAACCTTGTCGTTCTAATA
ACTATTGGAGTAACTGGTCAACTTCTAATCCGGGTGTGGATACGGCAACTGCCTATGATACTTCTTCGGATTGGACTTAT
TCTTATACTTATTACTACACTACTTTTAACTATGCGATAGCAAATGCAGATAGTGGCATTCCAAAATCAAAAACAAATGA
TACGACAAGCAATCCAAATATTGTTGTAGATAGAAATGCCTCTAATTTAAATGCTATTTACCAATCTCCTTTGCCTACGG
TGGCCAATCGCCAGAGTTGTGATGGGCAAGGAATCTACTTTTTATCAGATGGGGAGCCGAACAATACAACAAATACGCGT
TCTGCAACTGTAATGTCGACAGCCCTAGGTAGCACTTTGGGAGCAAATTTTACTTGTTCTGGAGGTTTGTCTAACACGAC
AGCAGACTCTGGTTGGGCTTGTATGGGGGAATTTGCAAAAAGATTATTTGATAAAACAAAAAATCCAGCTGGAGTTTCTA
TTCAAACAGCATTTGTCGGTTTTGGTAGTGACTTTTCTAGTTTAAGTTCTTCTGATGTAAAAAATGCCTGTCGTTTAAGT
TCGAGAACCCAATCTGATCGTAAAAGTGATGATAATTGTTCGCCGAATCAGACCACAAATGCGGTCGCTGCACCTGGTTA
TGGAAATGGAGGATTTTTCCCTACCCAAAGTGCGCAAGGTGTAACAGATAGTGTTATCGCATTTATTAATAACTTAGATA
AAGTTCCTTTAGAACCCTTAACCACAGGTGCTATCTCTGTTCCTTATGATGCACTAAATCCTAAAAATTTACAGGAATAT
GGTTACTTACGTGCTTTTGAGCCAAACCCGGCTAACACCTACTTAACATGGCGAGGAAATTTAAAGAAATATCATGTTGT
TTTATCGGGAACAAATGCGGGCGCTTTTGAAGCTAATACAGGTGGGTTGGTTTACAACGCAACTGGGGCATTTAGAACGG
GTACGAAAGATTATTGGAATAGCTCTACTTATAATGATGGAGGTAAAGTCTTTTTTGGTGGTTCATATGCAAAAGTTCCT
TTACCAATTGCTGGACAAAATGAAACACGTGATGAAGAAGGAAATATCACAAAATATTATTATGCAGTACAAACTAAAAT
CCGCAACTTATTTACTGATGTTTCCGCCGTCGCATCAGATGGTAGCTTAACGAAAATATCGACTTCTGGAACTAATTTGC
TAAAAATTCCAGCTACTCCACCAGAAGGAACTAATCCTTTTGATAGTGTGGCTAATACAGCAAGTTATATTTTAGGAAAA
TTTAATGCATCAACGGGACAAGATATTTTAAAAGCTTTCCCGATTAGCTTGAAATTAAAAATATTAAATTATCTAGGTTA
CTCAACTGATATTAGCGCTACGACCTTACCTTCGTCATTAGTTACATCGAATGAACCCTATTTATCGATGGGTGGTAGTA
TTCATTCTTTACCGGTACAGCTTACCTATAATGGAACATTAGATGAAAATGGGAATTTAACATCTGCGCGTGAACAATCC
ATTCTCTATGGAACGATGGAAGGTGGTCTGCATATTGTGGATGCCTCAACTGGTGTAGAACAAATGGCTTTCGTTCCGGC
TGATATATTAAATGATCCAGTTGCATCAAAAGCTTTAGTGGTTGGCCAAAGTGATGCCTCAGCTCCTGCTCACGGTATGG
ATGGGGCTTGGGTATCTGACCCTGCATATAGTATTACTACAACGGGAAGCGGTAACTCAGCAGTATCAAAAGTAACTGCA
AAGCAAATGAATATTTATGGTGGCATGCGAATGGGGGGCAGCAGCTATTATGGCTTAAATGTCTTAAATCCTGCTTCACC
TAAGCTTCTCTTTAGAGTAGGAGCAGATCAAACTGATTATAGTCGCATGGGGCAGAGTTGGTCTAAACCTGTACTTGCAA
ATATACGTTATAACGGGGTGATTAAACGGGTTATGATTGTTGGTGGTGGCTACGACCAATGTTATGAAAACCCGAATATT
ACCTTGAGCAACTCTTGCTTTACGAATGGAAAAGCAAAAGGGAATGCTGTTTATATTATTGATGCTAAAACTGGGGAGCG
CTTATGGTGGACTAGTGATACAGGCTCTAATATAGATAACTCTAATATGAAGCACAGTATTGTTAGTCGCATTAGTACCT
TAGATCGAGATGCTGATGGTTTAATCGACCATTTATATTTTGGCGATTTAGGCGGACAAGTTTTCCGTATCGATCTTAAT
AATAACCAGACAAAAACAAATTCAACTTATAGCAGTTTCGGTATTCGAGTTGTTCGATTAGCCAATTTGGCAACAAATGA
CTCAACTTATGATGCTTCGAATGACTATACCGCTGGGAATGCGCCGCGTTTTTATGAACCGCCAACAGTGACAATTCATG
ATTATGGAATCCGCACTTTTATTACTGTAGGTATTGCTTCAGGTGACCGTAGTACTCCTTTAGATGTTTATCCGCTTACA
GGTCGTGAGGGGATGTCACCGAGCACGGCATTAAGCGGAAGACCTGTAAACAACGTCTATGGAATTATCGATAAAGACTT
TATTAAAAAGAACTTAATGTCTTTAACAGATAGCCAGCTTGAAACGAAAGATATTACTCGATCGATGCTTCGAAAAAATC
CACAAATTTTACGATCTGGGGAAACACGAGTAGCACAGATTTTCTTTCCAAACTCTGGGACGGGACAAAATGGTTGGTAT
CGTTCACTTTCTAGTATGAGCGATGGTACCGAGAAAGCTAATAATAGTTTCCGTATTAAAGGAGGTCTCAAAGCTTTTGA
AGAGCCTATGGCAATTACAGGGACTTTAATTGTGCCTGTTTATGATCCACAGGGAACAGGTATTGTAGCGGCAGACCCAT
GTTTACCTCGGGTAGTAGGTGAAACTGACCAGCAGACGTTCTGTTTACCATTTGGCGCCTGCCTTAATTCTGATGGATCA
ATTGATCAGAATAAAGAGAATGGAAGTGGATTCAGAACAAAAACTGGTACTAATTGCCCAGTAGGAGCTTCTGAATGTAA
TACAAATATCATTGGCTCAGGTATTCGTGGCATAGCATTCGTTCCAAAAAGAGATGTACCTCCAGTGACTAATAGTTGTG
GGAAATTACAACTGTCTGGAAACGAGAGTGGAACGGGCGAGTGGCAATGTACAAGTCACTTAGTTCCTGCGCGCTGGTAT
GAGCGTTATCGCTAA

Domains

Predicted by InterproScan.

• von Willebrand factor type A domain (VWA_2) (51-159)

• Neisseria PilC beta-propeller domain (T4P_PilY1) (714-965)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY1	Acinetobacter baumannii D1279779	84.496	100	0.849