Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | AB3435_RS07555 | Genome accession | NZ_CP162438 |
| Coordinates | 1530136..1530606 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain TUM22458 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1525136..1535606
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3435_RS07515 (AB3435_07515) | - | 1525148..1525471 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| AB3435_RS07520 (AB3435_07520) | - | 1525468..1525629 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| AB3435_RS07525 (AB3435_07525) | - | 1525724..1526026 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| AB3435_RS07530 (AB3435_07530) | - | 1526031..1526291 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| AB3435_RS07535 (AB3435_07535) | - | 1526300..1526563 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| AB3435_RS07540 (AB3435_07540) | - | 1526572..1528515 (+) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| AB3435_RS07545 (AB3435_07545) | - | 1528517..1529437 (+) | 921 | WP_042109507.1 | recombinase RecT | - |
| AB3435_RS07550 (AB3435_07550) | - | 1529518..1530135 (+) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| AB3435_RS07555 (AB3435_07555) | ssbA | 1530136..1530606 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3435_RS07560 (AB3435_07560) | - | 1530636..1531531 (+) | 896 | Protein_1487 | DnaD domain protein | - |
| AB3435_RS07565 (AB3435_07565) | - | 1531538..1531756 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| AB3435_RS07570 (AB3435_07570) | - | 1531765..1532169 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AB3435_RS07575 (AB3435_07575) | - | 1532182..1532553 (+) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| AB3435_RS07580 (AB3435_07580) | - | 1532553..1532810 (+) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| AB3435_RS07585 (AB3435_07585) | - | 1532807..1533055 (+) | 249 | WP_000178987.1 | SAV1978 family virulence-associated passenger protein | - |
| AB3435_RS07590 (AB3435_07590) | - | 1533070..1533315 (+) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| AB3435_RS07595 (AB3435_07595) | - | 1533312..1533848 (+) | 537 | WP_000185693.1 | dUTPase | - |
| AB3435_RS07600 (AB3435_07600) | - | 1533885..1534130 (+) | 246 | WP_001282077.1 | hypothetical protein | - |
| AB3435_RS07605 (AB3435_07605) | - | 1534127..1534333 (+) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| AB3435_RS07610 (AB3435_07610) | - | 1534330..1534479 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| AB3435_RS07615 (AB3435_07615) | - | 1534479..1534679 (+) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| AB3435_RS07620 (AB3435_07620) | - | 1534707..1535123 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1025546 AB3435_RS07555 WP_000934759.1 1530136..1530606(+) (ssbA) [Staphylococcus aureus strain TUM22458]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1025546 AB3435_RS07555 WP_000934759.1 1530136..1530606(+) (ssbA) [Staphylococcus aureus strain TUM22458]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |