Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   AB3424_RS07755 Genome accession   NZ_CP162436
Coordinates   1538375..1539418 (-) Length   347 a.a.
NCBI ID   WP_117219619.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TUM22699     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1533375..1544418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3424_RS07725 (AB3424_07725) - 1533793..1535049 (-) 1257 WP_001795438.1 aminopeptidase -
  AB3424_RS07730 (AB3424_07730) - 1535052..1535252 (-) 201 WP_000180461.1 DUF1128 family protein -
  AB3424_RS07735 (AB3424_07735) - 1535399..1535863 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  AB3424_RS07740 (AB3424_07740) - 1535870..1536145 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  AB3424_RS07745 (AB3424_07745) - 1536423..1537640 (+) 1218 WP_000037069.1 YihY/virulence factor BrkB family protein -
  AB3424_RS07750 (AB3424_07750) vraR 1537756..1538385 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  AB3424_RS07755 (AB3424_07755) vraS 1538375..1539418 (-) 1044 WP_117219619.1 sensor histidine kinase Regulator
  AB3424_RS07760 (AB3424_07760) liaF 1539415..1540116 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  AB3424_RS07765 (AB3424_07765) - 1540131..1540517 (-) 387 WP_001110179.1 hypothetical protein -
  AB3424_RS07770 (AB3424_07770) map 1540734..1541492 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  AB3424_RS07775 (AB3424_07775) - 1542079..1543065 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  AB3424_RS07780 (AB3424_07780) - 1543496..1543909 (-) 414 WP_001549145.1 hypothetical protein -
  AB3424_RS07785 (AB3424_07785) - 1543938..1544048 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40043.58 Da        Isoelectric Point: 6.4212

>NTDB_id=1025481 AB3424_RS07755 WP_117219619.1 1538375..1539418(-) (vraS) [Staphylococcus aureus strain TUM22699]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMKGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1025481 AB3424_RS07755 WP_117219619.1 1538375..1539418(-) (vraS) [Staphylococcus aureus strain TUM22699]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGAAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment