Detailed information NTG1024794

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: AB3L00_RS13410
• Genome accession: NZ_CP162300
• Coordinates: 2872488..2873606 (+)
• Length: 372 a.a.
• NCBI ID: WP_368217401.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SIMBA113
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2867488..2878606

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3L00_RS13400 (AB3L00_13400)	-	2870604..2871296 (-)	693	WP_001108509.1	YggS family pyridoxal phosphate-dependent enzyme	-
AB3L00_RS13405 (AB3L00_13405)	pilT	2871423..2872460 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
AB3L00_RS13410 (AB3L00_13410)	pilU	2872488..2873606 (+)	1119	WP_368217401.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
AB3L00_RS13415 (AB3L00_13415)	fur	2873676..2874113 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
AB3L00_RS13420 (AB3L00_13420)	-	2874225..2874623 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
AB3L00_RS13425 (AB3L00_13425)	-	2874678..2875001 (-)	324	WP_000442590.1	RnfH family protein	-
AB3L00_RS13430 (AB3L00_13430)	-	2875001..2876068 (-)	1068	WP_004748097.1	hypothetical protein	-
AB3L00_RS13435 (AB3L00_13435)	-	2876221..2876676 (-)	456	WP_000782976.1	bacteriohemerythrin	-
AB3L00_RS13440 (AB3L00_13440)	-	2876929..2877777 (-)	849	WP_000336554.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41877.06 Da
• Isoelectric Point: 6.6942

>NTDB_id=1024794 AB3L00_RS13410 WP_368217401.1 2872488..2873606(+) (pilU) [Acinetobacter baumannii strain SIMBA113]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFADTRECNFAIMNRDKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=1024794 AB3L00_RS13410 WP_368217401.1 2872488..2873606(+) (pilU) [Acinetobacter baumannii strain SIMBA113]
ATGGATTTTAATGACCTACTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGCCTTTCTGGGGAAGTAATTGGTCAACTGTTACATTCCA
TTATGAGTGAAAAACAACGCAAAGAATTTGCAGACACTCGTGAATGTAACTTTGCCATTATGAACCGTGATAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCAGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGTGGCATTATTATTTTCGTAGGTGCGACAG
GTACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGATCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAGGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (34-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.397	100	0.766
pilU	Pseudomonas stutzeri DSM 10701	69.022	98.925	0.683
pilU	Vibrio cholerae strain A1552	53.784	99.462	0.535
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392