Detailed information NTG1024464

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQN28_RS05335
• Genome accession: NZ_LS483430
• Coordinates: 1050486..1051448 (-)
• Length: 320 a.a.
• NCBI ID: WP_111686306.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12044
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1045486..1056448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN28_RS05320 (NCTC12044_01064)	-	1046322..1047029 (-)	708	WP_002984000.1	O-methyltransferase	-
DQN28_RS05325 (NCTC12044_01065)	-	1047095..1048291 (-)	1197	WP_023079899.1	OFA family MFS transporter	-
DQN28_RS05330 (NCTC12044_01066)	pepF	1048668..1050473 (-)	1806	WP_023079941.1	oligoendopeptidase F	Regulator
DQN28_RS05335 (NCTC12044_01067)	coiA	1050486..1051448 (-)	963	WP_111686306.1	competence protein CoiA	Machinery gene
DQN28_RS05340 (NCTC12044_01068)	-	1051744..1052460 (-)	717	WP_002995774.1	pseudouridine synthase	-
DQN28_RS05345 (NCTC12044_01069)	nagB	1052579..1053283 (-)	705	WP_002995779.1	glucosamine-6-phosphate deaminase	-
DQN28_RS05350 (NCTC12044_01070)	queA	1053485..1054513 (+)	1029	WP_002983989.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
DQN28_RS05355 (NCTC12044_01071)	-	1054520..1055740 (+)	1221	WP_023079925.1	DUF3114 domain-containing protein	-
DQN28_RS05360 (NCTC12044_01072)	-	1055854..1056444 (-)	591	WP_111686307.1	serine hydrolase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37786.19 Da
• Isoelectric Point: 10.2342

>NTDB_id=1024464 DQN28_RS05335 WP_111686306.1 1050486..1051448(-) (coiA) [Streptococcus pyogenes strain NCTC12044]
MTKILTALDGKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLV
RTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKRTKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSS
SLGFHLWELDAAANLLRLKYLIHEDLFGKVSYLTKTISLDHNIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHP
KWLRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIEGNLRPYYESFKVYYKKEKDKKVQTLFSPKFYVKMDSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=1024464 DQN28_RS05335 WP_111686306.1 1050486..1051448(-) (coiA) [Streptococcus pyogenes strain NCTC12044]
GTGACAAAAATATTAACCGCTTTAGATGGTAAGAATCAGCTCATTTCGCTAGTAACTCAGCCTATTTCAACGAAACCGCC
TTTTCGTTGCCCAGCTTGCAAATCTCCTGTTCGCTTGCGTCAGGGGACAATTAGACGACCTCATTTTGCCCATGTACAAC
TAGCTCATTGTCAATTCCAAGCAGAAAATGAATCTGAGGAACATTTGACGTTGAAGGCAAAACTTTACACCAGTTTAGTC
CGAACAGAAGCTGTCTGTATTGAAAAATATCTTCCTGAGCTGCAACAGATAGCAGACCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGTCCCTTGCCAGTTGAGCGTCTAAAGAAACGCACCAAAGCCTATCAAGAAAAGGGGTATCCGG
TACGATGGTTACTGGGAAGAAAATTGTGGCTTAACACTCACTTAACTGCTTTGCAAAAACAGTTTCTTTACTTTTCATCT
AGTTTGGGCTTTCATTTGTGGGAGCTGGATGCAGCTGCAAATCTGCTACGTCTCAAATATTTAATCCATGAAGACTTATT
TGGTAAGGTAAGTTACCTAACCAAAACCATTTCTTTAGACCACAATATTATGGAAATGTTTCGATTACCCTATCAGCAAG
AAATCCTTTATTCTTATCAGAAAAAAATGACTGTGAACCTATCTAAAAGAATACAAAGAGCTCTTTTAGCTAGACACCCG
AAATGGCTACGACGACAAGAAAAGGCTTACTTATCAGGCTATAATTTACTTATGTTAACAACTGATGCTTTTTATCCTCA
ATGGAGACCAGTTCAATCTTCCAGCGGTTTTTGTCAAATTGAAGGAAATCTTCGCCCTTATTATGAAAGTTTTAAAGTCT
ATTATAAAAAAGAAAAGGATAAGAAGGTGCAAACGCTTTTTTCACCAAAATTTTATGTTAAAATGGATAGTAATAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	43.548	96.875	0.422
coiA	Streptococcus pneumoniae Rx1	42.258	96.875	0.409
coiA	Streptococcus pneumoniae D39	42.258	96.875	0.409
coiA	Streptococcus pneumoniae R6	42.258	96.875	0.409
coiA	Streptococcus pneumoniae TIGR4	42.258	96.875	0.409
coiA	Lactococcus lactis subsp. cremoris KW2	39.329	100	0.403