Detailed information NTG1023286

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: DQN33_RS06660
• Genome accession: NZ_LS483408
• Coordinates: 1346362..1348620 (-)
• Length: 752 a.a.
• NCBI ID: WP_100912143.1
• Uniprot ID: -
• Organism: Streptococcus uberis strain NCTC4674
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1341362..1353620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN33_RS06635 (NCTC4674_01418)	nagB	1341416..1342120 (-)	705	WP_046388175.1	glucosamine-6-phosphate deaminase	-
DQN33_RS06640 (NCTC4674_01419)	queA	1342301..1343329 (+)	1029	WP_012658715.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
DQN33_RS06645 (NCTC4674_01420)	-	1343369..1344358 (-)	990	WP_415244971.1	serine hydrolase	-
DQN33_RS06650 (NCTC4674_01421)	sodA	1344574..1345182 (-)	609	WP_012658717.1	superoxide dismutase SodA	-
DQN33_RS06655 (NCTC4674_01422)	holA	1345279..1346319 (-)	1041	WP_012658718.1	DNA polymerase III subunit delta	-
DQN33_RS06660 (NCTC4674_01423)	comEC/celB	1346362..1348620 (-)	2259	WP_100912143.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
DQN33_RS06665 (NCTC4674_01424)	comEA/celA/cilE	1348601..1349281 (-)	681	WP_111673357.1	helix-hairpin-helix domain-containing protein	Machinery gene
DQN33_RS06670 (NCTC4674_01425)	-	1349343..1350083 (-)	741	WP_012658721.1	lysophospholipid acyltransferase family protein	-
DQN33_RS06675 (NCTC4674_01426)	-	1350206..1350991 (+)	786	WP_111673358.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
DQN33_RS06680 (NCTC4674_01427)	-	1351032..1351301 (+)	270	WP_012658723.1	GIY-YIG nuclease family protein	-
DQN33_RS06685 (NCTC4674_01428)	-	1351323..1353320 (-)	1998	WP_046389518.1	KUP/HAK/KT family potassium transporter	-

Sequence

Protein

• Length: 752 a.a.
• Molecular weight: 86046.35 Da
• Isoelectric Point: 10.0858

>NTDB_id=1023286 DQN33_RS06660 WP_100912143.1 1346362..1348620(-) (comEC/celB) [Streptococcus uberis strain NCTC4674]
MTSLLTKFFPIPIPQFSLLCLLVFFAVHFPNKISVCLFLSALVVAFKHRALKRNVKLSCLLMLFASYVYFTKSYQESQFR
QEPTRIESVILVPDSVVINGDSLSFKARKGKNHFQIFYQLKNKKEQDFFKKNNQLLQISGSIELKKAERKRYFNGFDYQD
HLKNQGIYRIGRLKEIKSIGVRKAESFFDYLAIWRRYAIVRSQVQFPKPMSDYMTGLLFGYLDKSFSEMTEIYSQLGIIH
LFALSGMQVSFFLNLFRKGLILSWIPRDFYPILELCFSIIYAGLTGYSISVLRSLLQRNLANMGLKGSTNLCLAFLLMFL
ISPFFPLTIGGVLSFVYAFLLTLIPSENTSGLKGKILGLFYLQLATIPFLILFFSTFHPVSIILTLIFSFLFDILILPLL
TFIFLISPVLTGYHLNSLFQMLEKIMVNVVELFPHPIIFGQPPILVFLSLIFIVALIMAFANRKTYLLSFLIIYFFLLKT
ISIPFENEISIVDVGQGDSILLRDKTNKTLLIDVGGTVAFQGKEDWQKRSSNANAERTLIPYLKSRGIKEIDQLLLTHID
TDHVGDLEVVAKSFKIKEILVSEGSLTNSNFVHRLSKLGNPVTVLKVGNSIDIMNGKLYLIYPWKKGDGRNNDSLVLYGK
LLNKSFLFTGDLEKEGEDAILKRYPSMKTDYLKVGHHGSKGSSSNDFLKVLKPKVAFISAGKDNRFHHPHKETLDRLIEN
HVEILRTDQEGTLRLTGTHQWRLERTHPNLDK

Nucleotide

• Length: 2259 bp

>NTDB_id=1023286 DQN33_RS06660 WP_100912143.1 1346362..1348620(-) (comEC/celB) [Streptococcus uberis strain NCTC4674]
ATGACATCATTATTGACTAAGTTTTTCCCAATTCCCATTCCACAGTTTTCTTTGCTGTGCTTATTGGTCTTTTTTGCTGT
ACATTTCCCAAACAAAATCAGTGTTTGCTTATTCTTATCAGCTTTAGTTGTCGCCTTCAAACATAGGGCATTAAAAAGAA
ATGTAAAGCTTTCTTGTCTTCTTATGTTATTTGCCTCATATGTTTATTTCACCAAATCTTATCAGGAGAGTCAATTCAGG
CAAGAACCAACACGAATTGAATCTGTTATCTTAGTTCCAGATTCTGTTGTTATAAACGGTGATAGTCTATCTTTTAAAGC
AAGAAAAGGAAAAAATCATTTTCAAATTTTTTACCAATTGAAGAACAAAAAAGAGCAAGACTTTTTTAAGAAAAATAATC
AGCTGTTACAAATCAGTGGAAGTATTGAACTCAAAAAAGCTGAGAGGAAACGCTACTTTAATGGTTTTGACTATCAGGAC
CATCTGAAAAATCAAGGAATCTATCGAATTGGTCGTTTGAAAGAGATAAAATCAATTGGCGTTCGAAAAGCTGAAAGTTT
TTTCGATTATTTAGCTATTTGGCGTCGATATGCCATAGTAAGGAGTCAAGTTCAGTTTCCTAAGCCCATGTCTGATTACA
TGACTGGATTATTATTTGGGTATTTGGATAAATCATTCTCTGAGATGACAGAAATTTATAGTCAATTAGGAATCATACAT
CTTTTTGCCTTGTCAGGAATGCAGGTATCCTTCTTTTTAAATCTCTTCCGAAAGGGATTAATCTTAAGTTGGATTCCAAG
AGACTTTTATCCTATTTTAGAATTATGTTTTTCGATTATTTATGCTGGTTTAACAGGTTATAGCATTTCAGTATTAAGAA
GTCTATTGCAGCGAAATTTGGCAAATATGGGTTTGAAAGGAAGTACAAATTTATGCCTGGCTTTTCTCCTAATGTTCTTG
ATATCTCCTTTTTTTCCATTAACCATTGGCGGAGTCTTGTCCTTTGTCTATGCCTTCCTTTTAACTCTCATTCCCTCTGA
AAATACATCAGGATTAAAAGGGAAAATTTTAGGGCTTTTTTACTTACAATTGGCCACTATTCCTTTTTTAATCTTATTTT
TTTCAACATTTCACCCAGTATCAATCATTTTAACACTTATCTTTTCTTTTTTATTCGATATCCTTATTCTTCCCTTGCTT
ACTTTTATTTTTCTAATAAGTCCAGTATTGACCGGTTACCACCTTAACAGTTTATTTCAAATGTTAGAAAAAATCATGGT
CAATGTAGTTGAATTGTTTCCTCATCCGATTATTTTTGGTCAACCACCTATTTTAGTCTTTCTCTCGCTTATCTTTATAG
TTGCATTGATAATGGCTTTTGCTAATCGAAAAACCTATCTCCTGTCATTTTTGATAATTTATTTTTTCCTTTTAAAAACG
ATTTCAATTCCCTTTGAAAATGAGATATCAATTGTGGATGTTGGTCAAGGAGATAGCATTCTTCTGAGAGATAAAACTAA
TAAAACGCTCTTAATTGATGTTGGTGGCACAGTAGCTTTTCAAGGAAAAGAAGATTGGCAAAAAAGAAGCAGCAATGCAA
ATGCAGAAAGAACCTTAATTCCATATTTAAAATCAAGAGGCATTAAAGAAATTGATCAATTACTCTTAACACACATTGAT
ACTGACCATGTTGGAGATTTGGAAGTGGTGGCAAAGTCATTTAAAATAAAAGAGATTCTTGTTAGTGAAGGAAGTTTAAC
AAATAGTAATTTCGTTCATCGTTTGTCAAAATTAGGGAATCCCGTCACCGTCTTAAAAGTTGGTAATAGTATTGATATTA
TGAATGGAAAGCTATACCTCATTTATCCATGGAAAAAGGGAGATGGTCGAAATAATGACTCACTTGTTTTATATGGAAAA
CTCTTAAACAAGTCCTTCCTTTTTACTGGTGATTTAGAAAAGGAAGGAGAAGATGCAATACTAAAAAGATACCCTTCAAT
GAAGACTGATTATTTAAAAGTTGGACATCATGGTTCTAAAGGGTCATCTAGTAACGATTTTCTAAAAGTTCTCAAACCTA
AAGTGGCATTTATTTCGGCGGGAAAAGACAATAGGTTTCATCATCCTCATAAAGAGACCTTAGACAGGCTTATAGAGAAT
CATGTTGAAATACTAAGGACAGATCAAGAGGGGACTCTACGCCTCACAGGGACTCATCAGTGGCGCTTGGAGAGAACGCA
TCCGAATTTAGATAAATAG

Domains

Predicted by InterProScan.

• Competence protein (Competence) (217-461)

• Metallo-beta-lactamase superfamily (Lactamase_B) (493-701)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	43.876	98.803	0.434
comEC/celB	Streptococcus mitis NCTC 12261	43.742	98.803	0.432
comEC	Lactococcus lactis subsp. cremoris KW2	42.61	99.867	0.426
comEC/celB	Streptococcus pneumoniae TIGR4	42.992	98.67	0.424
comEC/celB	Streptococcus pneumoniae Rx1	42.857	98.67	0.423
comEC/celB	Streptococcus pneumoniae D39	42.857	98.67	0.423
comEC/celB	Streptococcus pneumoniae R6	42.857	98.67	0.423