Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AB2M34_RS09190 | Genome accession | NZ_CP161903 |
| Coordinates | 1728310..1729380 (+) | Length | 356 a.a. |
| NCBI ID | WP_129134318.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain DYJ24 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1723310..1734380
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB2M34_RS09155 (AB2M34_09155) | yqgY | 1723505..1723750 (-) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
| AB2M34_RS09160 (AB2M34_09160) | mgsR | 1723982..1724362 (+) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| AB2M34_RS09170 (AB2M34_09170) | rsbRD | 1724586..1725422 (+) | 837 | WP_121548936.1 | RsbT co-antagonist protein RsbRD | - |
| AB2M34_RS09175 (AB2M34_09175) | yqhB | 1725475..1726803 (-) | 1329 | WP_129134321.1 | hemolysin family protein | - |
| AB2M34_RS09180 (AB2M34_09180) | corA | 1726946..1727899 (+) | 954 | WP_129134320.1 | magnesium transporter CorA | - |
| AB2M34_RS09185 (AB2M34_09185) | - | 1727901..1728098 (+) | 198 | WP_129134319.1 | hypothetical protein | - |
| AB2M34_RS09190 (AB2M34_09190) | comGA | 1728310..1729380 (+) | 1071 | WP_129134318.1 | competence protein ComGA | Machinery gene |
| AB2M34_RS09195 (AB2M34_09195) | comGB | 1729367..1730404 (+) | 1038 | WP_044052501.1 | comG operon protein ComGB | Machinery gene |
| AB2M34_RS09200 (AB2M34_09200) | comGC | 1730418..1730714 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AB2M34_RS09205 (AB2M34_09205) | comGD | 1730704..1731135 (+) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| AB2M34_RS09210 (AB2M34_09210) | comGE | 1731119..1731466 (+) | 348 | WP_087614620.1 | ComG operon protein 5 | Machinery gene |
| AB2M34_RS09215 (AB2M34_09215) | comGF | 1731492..1731875 (+) | 384 | WP_076458111.1 | ComG operon protein ComGF | Machinery gene |
| AB2M34_RS09220 (AB2M34_09220) | comGG | 1731876..1732250 (+) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| AB2M34_RS09225 (AB2M34_09225) | spoIITA | 1732322..1732501 (+) | 180 | WP_029726723.1 | YqzE family protein | - |
| AB2M34_RS09230 (AB2M34_09230) | yqzG | 1732543..1732869 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| AB2M34_RS09235 (AB2M34_09235) | tapA | 1733141..1733902 (+) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40442.58 Da Isoelectric Point: 9.1529
>NTDB_id=1023064 AB2M34_RS09190 WP_129134318.1 1728310..1729380(+) (comGA) [Bacillus subtilis strain DYJ24]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEESVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEESVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=1023064 AB2M34_RS09190 WP_129134318.1 1728310..1729380(+) (comGA) [Bacillus subtilis strain DYJ24]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGAGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACTAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGAGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACTAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |
| pilF | Thermus thermophilus HB27 |
36.827 |
99.157 |
0.365 |