Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AB2M34_RS09195 | Genome accession | NZ_CP161903 |
| Coordinates | 1729367..1730404 (+) | Length | 345 a.a. |
| NCBI ID | WP_044052501.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain DYJ24 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1724367..1735404
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB2M34_RS09170 (AB2M34_09170) | rsbRD | 1724586..1725422 (+) | 837 | WP_121548936.1 | RsbT co-antagonist protein RsbRD | - |
| AB2M34_RS09175 (AB2M34_09175) | yqhB | 1725475..1726803 (-) | 1329 | WP_129134321.1 | hemolysin family protein | - |
| AB2M34_RS09180 (AB2M34_09180) | corA | 1726946..1727899 (+) | 954 | WP_129134320.1 | magnesium transporter CorA | - |
| AB2M34_RS09185 (AB2M34_09185) | - | 1727901..1728098 (+) | 198 | WP_129134319.1 | hypothetical protein | - |
| AB2M34_RS09190 (AB2M34_09190) | comGA | 1728310..1729380 (+) | 1071 | WP_129134318.1 | competence protein ComGA | Machinery gene |
| AB2M34_RS09195 (AB2M34_09195) | comGB | 1729367..1730404 (+) | 1038 | WP_044052501.1 | comG operon protein ComGB | Machinery gene |
| AB2M34_RS09200 (AB2M34_09200) | comGC | 1730418..1730714 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AB2M34_RS09205 (AB2M34_09205) | comGD | 1730704..1731135 (+) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| AB2M34_RS09210 (AB2M34_09210) | comGE | 1731119..1731466 (+) | 348 | WP_087614620.1 | ComG operon protein 5 | Machinery gene |
| AB2M34_RS09215 (AB2M34_09215) | comGF | 1731492..1731875 (+) | 384 | WP_076458111.1 | ComG operon protein ComGF | Machinery gene |
| AB2M34_RS09220 (AB2M34_09220) | comGG | 1731876..1732250 (+) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| AB2M34_RS09225 (AB2M34_09225) | spoIITA | 1732322..1732501 (+) | 180 | WP_029726723.1 | YqzE family protein | - |
| AB2M34_RS09230 (AB2M34_09230) | yqzG | 1732543..1732869 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| AB2M34_RS09235 (AB2M34_09235) | tapA | 1733141..1733902 (+) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AB2M34_RS09240 (AB2M34_09240) | sipW | 1733886..1734458 (+) | 573 | WP_129134142.1 | signal peptidase I SipW | - |
| AB2M34_RS09245 (AB2M34_09245) | tasA | 1734523..1735308 (+) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39746.21 Da Isoelectric Point: 9.6257
>NTDB_id=1023065 AB2M34_RS09195 WP_044052501.1 1729367..1730404(+) (comGB) [Bacillus subtilis strain DYJ24]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1023065 AB2M34_RS09195 WP_044052501.1 1729367..1730404(+) (comGB) [Bacillus subtilis strain DYJ24]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.69 |
93.623 |
0.933 |