Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   AB1395_RS07000 Genome accession   NZ_CP161815
Coordinates   1383019..1384365 (-) Length   448 a.a.
NCBI ID   WP_218653508.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SS-15     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1378019..1389365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1395_RS06990 (AB1395_06990) rnc 1381273..1381974 (-) 702 WP_104968252.1 ribonuclease III -
  AB1395_RS06995 (AB1395_06995) vicX 1382208..1383017 (-) 810 WP_218653507.1 MBL fold metallo-hydrolase Regulator
  AB1395_RS07000 (AB1395_07000) vicK 1383019..1384365 (-) 1347 WP_218653508.1 cell wall metabolism sensor histidine kinase VicK Regulator
  AB1395_RS07005 (AB1395_07005) vicR 1384358..1385065 (-) 708 WP_104968255.1 response regulator YycF Regulator
  AB1395_RS07010 (AB1395_07010) - 1385305..1386090 (+) 786 WP_115130595.1 amino acid ABC transporter ATP-binding protein -
  AB1395_RS07015 (AB1395_07015) - 1386101..1386928 (+) 828 WP_367783176.1 transporter substrate-binding domain-containing protein -
  AB1395_RS07020 (AB1395_07020) - 1386947..1387642 (+) 696 WP_104968258.1 amino acid ABC transporter permease -
  AB1395_RS07025 (AB1395_07025) - 1387651..1388301 (+) 651 WP_218653510.1 amino acid ABC transporter permease -
  AB1395_RS07030 (AB1395_07030) - 1388387..1388986 (-) 600 WP_104968260.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 448 a.a.        Molecular weight: 51100.08 Da        Isoelectric Point: 4.6899

>NTDB_id=1022597 AB1395_RS07000 WP_218653508.1 1383019..1384365(-) (vicK) [Streptococcus pluranimalium strain SS-15]
MTDQFLFSFRDVIIAGLMSVLVLIYVFLIIRDTLNSRRVQQLTEQVQALISGEYVVNQVTRGSAEVKDLAEHLNDLSEVF
RLTHENLGQEKNRLSSILSYMSDGVLATDRRGNIIMINDMARQQLNLSEEGDLAINIMTLLEDTSYTYHDLITKTPEVTL
NRVDEFGEFTVLRVNFALIKRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALKEAV
APGFIRVSLDETNRMMRMITDLLSLSRIDNNNSELEVELTNFTAFITYILNRFDRIKLQETHAGKSYDIKRNYDLTPVWI
EIDNDKMTQVFDNILNNAIKYSPDGGEIKVSMRTTDTQLIVSVSDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTGLGL
AITKEIVKQHNGFIWAKSDYGKGSTFTIVLPYEKNILEVDEEWEVTED

Nucleotide


Download         Length: 1347 bp        

>NTDB_id=1022597 AB1395_RS07000 WP_218653508.1 1383019..1384365(-) (vicK) [Streptococcus pluranimalium strain SS-15]
ATGACTGATCAATTTCTTTTTTCATTTCGAGATGTTATTATTGCAGGGCTAATGTCAGTTTTAGTCCTGATTTATGTTTT
TTTAATTATTCGAGATACTTTAAATAGTCGACGTGTGCAACAATTGACGGAGCAAGTTCAAGCCTTGATTTCAGGTGAGT
ATGTGGTCAATCAGGTAACACGAGGAAGTGCTGAAGTTAAGGACTTAGCTGAACATTTGAACGATCTATCTGAGGTTTTT
CGTCTAACACATGAAAATTTAGGACAAGAAAAAAATCGTCTTTCAAGTATTTTATCCTATATGAGCGATGGGGTTTTAGC
AACAGACCGTCGTGGTAATATCATTATGATTAATGATATGGCAAGGCAACAGTTGAACTTATCAGAAGAAGGTGACCTTG
CCATCAATATTATGACTTTGTTAGAAGATACCTCGTATACTTATCATGATTTAATAACCAAAACACCCGAAGTAACGCTT
AACCGTGTCGATGAGTTTGGTGAATTTACGGTGCTGAGGGTCAATTTTGCTCTTATCAAGAGAGAGAGTGGTTTTATATC
TGGTTTGGTAGCCGTTTTACACGATACAACAGAACAAGAAAAAGAGGAACGTGAACGTCGTCTCTTTGTTTCCAATGTTA
GTCATGAATTGCGGACTCCTCTAACATCGGTAAAGTCGTATCTTGAAGCCTTGGATGAAGGGGCCCTTAAGGAAGCTGTT
GCCCCTGGGTTTATCCGTGTTTCCCTAGATGAAACAAACCGGATGATGCGGATGATTACAGACTTGCTATCCCTATCACG
TATTGATAATAATAATAGTGAATTAGAAGTTGAACTGACGAACTTTACAGCTTTTATCACCTATATCCTAAATCGTTTTG
ACCGCATCAAGTTACAGGAAACACATGCAGGAAAATCTTATGATATTAAGCGCAACTACGATCTGACTCCTGTTTGGATT
GAGATTGATAATGATAAGATGACCCAAGTTTTCGATAATATTTTAAACAATGCGATCAAGTATTCACCAGATGGTGGTGA
GATTAAGGTGAGCATGCGAACGACTGATACTCAATTAATTGTATCGGTATCTGACCAAGGATTGGGAATTCCTAAAAAAG
ACTTGCCTTTAATTTTTGACCGTTTCTACCGTGTTGATAAGGCAAGAAGTCGTGCCCAAGGAGGCACTGGACTTGGTCTA
GCAATTACCAAAGAAATTGTTAAACAACACAATGGCTTTATTTGGGCTAAAAGTGATTACGGTAAGGGATCAACGTTTAC
CATCGTTTTACCTTATGAAAAGAATATTTTAGAAGTAGACGAAGAATGGGAGGTAACTGAAGACTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(323-433)

His Kinase A (phospho-acceptor) domain (HisKA)

(206-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

71.29

91.741

0.654
  micB Streptococcus pneumoniae Cp1015

64.896

96.652

0.627

Multiple sequence alignment