Detailed information NTG1022061

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABZM97_RS18405
• Genome accession: NZ_CP160797
• Coordinates: 3680746..3681903 (-)
• Length: 385 a.a.
• NCBI ID: WP_087991561.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain BL-01
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3675746..3686903

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZM97_RS18375 (ABZM97_18375)	-	3676001..3676420 (-)	420	WP_148962628.1	TIGR03826 family flagellar region protein	-
ABZM97_RS18380 (ABZM97_18380)	comFC	3676490..3677212 (-)	723	WP_202327956.1	double zinc ribbon domain-containing protein	Machinery gene
ABZM97_RS18385 (ABZM97_18385)	-	3677176..3677472 (-)	297	WP_087991559.1	late competence development ComFB family protein	-
ABZM97_RS18390 (ABZM97_18390)	comFA	3677532..3678923 (-)	1392	WP_367387505.1	ATP-dependent helicase ComFA	Machinery gene
ABZM97_RS18395 (ABZM97_18395)	-	3679031..3679876 (-)	846	WP_087991560.1	DegV family protein	-
ABZM97_RS18400 (ABZM97_18400)	degU	3679974..3680663 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ABZM97_RS18405 (ABZM97_18405)	degS	3680746..3681903 (-)	1158	WP_087991561.1	two-component sensor histidine kinase DegS	Regulator
ABZM97_RS18410 (ABZM97_18410)	-	3682120..3682770 (+)	651	WP_087991562.1	YigZ family protein	-
ABZM97_RS18415 (ABZM97_18415)	-	3682773..3683885 (+)	1113	WP_087991563.1	LCP family protein	-
ABZM97_RS18420 (ABZM97_18420)	-	3683957..3685033 (-)	1077	WP_087991564.1	MraY family glycosyltransferase	-
ABZM97_RS18425 (ABZM97_18425)	-	3685178..3686371 (-)	1194	WP_367387506.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44987.74 Da
• Isoelectric Point: 6.2952

>NTDB_id=1022061 ABZM97_RS18405 WP_087991561.1 3680746..3681903(-) (degS) [Bacillus vallismortis strain BL-01]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGMLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGNVKIHFQCIGDTEDRRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=1022061 ABZM97_RS18405 WP_087991561.1 3680746..3681903(-) (degS) [Bacillus vallismortis strain BL-01]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGTCATGCGAGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATTCGCAATGCTTACGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAGCTGCGCGAACGCCGGGATGATTTAGAGCGCAGATTGTTAGGCCTTCAGGAAATCATTGAAC
GGTCTGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAAGATTTGCGCGAAGTCGGAATGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTTGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAAAGAAAAAGGGTCTCCAGAGA
AATTCATGACGGACCTGCTCAAATGCTGGCAAATGTGATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGCG
GCACTGAGGACGGTTTCCAAGAAATTAAAAATCTCCGTCAAAATGTGCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGAGAAAATATCTATATACAACAGAGGAATA
TAACGGTAATGTCAAAATACATTTTCAGTGTATCGGTGACACAGAGGATAGGCGGCTTGCGCCCCAGTTTGAAGTGGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCCGAATCTGAAGAAATTACTGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGGTTTGACCTGAAGGAAGCGAAAGAGAAGAAAAATAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATAACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATCAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	98.442	100	0.984