Detailed information NTG1022058

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: ABZM97_RS18380
• Genome accession: NZ_CP160797
• Coordinates: 3676490..3677212 (-)
• Length: 240 a.a.
• NCBI ID: WP_202327956.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain BL-01
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3671490..3682212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZM97_RS18345 (ABZM97_18345)	fliW	3671636..3672067 (-)	432	WP_087991552.1	flagellar assembly protein FliW	-
ABZM97_RS18350 (ABZM97_18350)	-	3672088..3672663 (-)	576	WP_202327958.1	DUF6470 family protein	-
ABZM97_RS18355 (ABZM97_18355)	flgL	3672710..3673606 (-)	897	WP_087991554.1	flagellar hook-associated protein FlgL	-
ABZM97_RS18360 (ABZM97_18360)	flgK	3673616..3675139 (-)	1524	WP_087991555.1	flagellar hook-associated protein FlgK	-
ABZM97_RS18365 (ABZM97_18365)	flgN	3675158..3675640 (-)	483	WP_087991556.1	flagellar protein FlgN	-
ABZM97_RS18370 (ABZM97_18370)	flgM	3675655..3675921 (-)	267	WP_087991557.1	flagellar biosynthesis anti-sigma factor FlgM	-
ABZM97_RS18375 (ABZM97_18375)	-	3676001..3676420 (-)	420	WP_148962628.1	TIGR03826 family flagellar region protein	-
ABZM97_RS18380 (ABZM97_18380)	comFC	3676490..3677212 (-)	723	WP_202327956.1	double zinc ribbon domain-containing protein	Machinery gene
ABZM97_RS18385 (ABZM97_18385)	-	3677176..3677472 (-)	297	WP_087991559.1	late competence development ComFB family protein	-
ABZM97_RS18390 (ABZM97_18390)	comFA	3677532..3678923 (-)	1392	WP_367387505.1	ATP-dependent helicase ComFA	Machinery gene
ABZM97_RS18395 (ABZM97_18395)	-	3679031..3679876 (-)	846	WP_087991560.1	DegV family protein	-
ABZM97_RS18400 (ABZM97_18400)	degU	3679974..3680663 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ABZM97_RS18405 (ABZM97_18405)	degS	3680746..3681903 (-)	1158	WP_087991561.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 27270.63 Da
• Isoelectric Point: 9.5015

>NTDB_id=1022058 ABZM97_RS18380 WP_202327956.1 3676490..3677212(-) (comFC) [Bacillus vallismortis strain BL-01]
MPNEAGGGIHKLICLLCDSQFSQAVTWKALFLLKTDEKVCHSCRSKLKKITGHICSLCGRPQSIHALCRDCEAWKSRVSD
SLLLRQNRSVYTYNEMMKETLSRFKFRGDAEIINAFKSDFSSTFSEVYPDKHVVLVPIPLSKEREKERGFNQAQLLAECL
DQPIRHALVRLNNEKQSKKKKKERLLSERIFDTKNNSVEGMNIILIDDLYTTGATLHFAARCLLEKGKAGSVASFTLIRS

Nucleotide

• Length: 723 bp

>NTDB_id=1022058 ABZM97_RS18380 WP_202327956.1 3676490..3677212(-) (comFC) [Bacillus vallismortis strain BL-01]
ATGCCAAACGAAGCAGGAGGAGGAATTCATAAACTGATCTGTCTATTATGCGATTCGCAATTTTCTCAAGCTGTTACATG
GAAAGCTCTTTTTTTATTAAAGACTGACGAAAAGGTCTGTCATTCCTGCAGAAGCAAATTAAAGAAAATCACAGGACATA
TCTGCTCGCTGTGCGGCAGGCCTCAATCCATTCATGCGCTATGCAGGGATTGCGAGGCGTGGAAATCAAGGGTCAGTGAC
AGCTTGCTGCTGCGCCAAAACCGTTCAGTTTACACATATAATGAAATGATGAAAGAAACACTCTCCCGTTTTAAATTTAG
AGGAGATGCAGAAATCATAAATGCGTTTAAAAGTGATTTCTCTTCAACTTTCTCAGAGGTTTACCCCGATAAGCATGTTG
TTCTCGTTCCTATTCCGCTGAGCAAGGAACGGGAAAAAGAGCGTGGATTTAACCAGGCACAGCTCCTCGCAGAATGCTTA
GACCAGCCTATCCGCCATGCCCTCGTTCGCTTGAATAATGAGAAACAGTCTAAGAAAAAGAAAAAAGAACGCCTTCTTTC
AGAGCGTATTTTTGATACAAAAAATAACTCAGTTGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG
CTACCTTGCATTTTGCAGCCCGCTGTTTATTAGAGAAAGGAAAAGCCGGTTCAGTGGCATCTTTTACCTTGATCAGAAGC
TAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (125-238)

• Double zinc ribbon domain (DZR_2) (14-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	88.333	100	0.883