Detailed information NTG1022043

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ABZM97_RS13115
• Genome accession: NZ_CP160797
• Coordinates: 2677884..2678498 (-)
• Length: 204 a.a.
• NCBI ID: WP_202327126.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain BL-01
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2672884..2683498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZM97_RS13085 (ABZM97_13085)	rpsT	2673186..2673452 (+)	267	WP_087990776.1	30S ribosomal protein S20	-
ABZM97_RS13090 (ABZM97_13090)	holA	2673467..2674510 (-)	1044	WP_289347738.1	DNA polymerase III subunit delta	-
ABZM97_RS13095 (ABZM97_13095)	-	2674550..2674699 (-)	150	WP_202327128.1	hypothetical protein	-
ABZM97_RS13100 (ABZM97_13100)	-	2674740..2674874 (+)	135	WP_003229983.1	YqzM family protein	-
ABZM97_RS13105 (ABZM97_13105)	comEC	2674929..2677244 (-)	2316	WP_367386875.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABZM97_RS13110 (ABZM97_13110)	-	2677248..2677817 (-)	570	WP_003237106.1	ComE operon protein 2	-
ABZM97_RS13115 (ABZM97_13115)	comEA	2677884..2678498 (-)	615	WP_202327126.1	helix-hairpin-helix domain-containing protein	Machinery gene
ABZM97_RS13120 (ABZM97_13120)	comER	2678582..2679403 (+)	822	WP_087990781.1	late competence protein ComER	-
ABZM97_RS13125 (ABZM97_13125)	-	2679469..2680212 (-)	744	WP_087990782.1	class I SAM-dependent methyltransferase	-
ABZM97_RS13130 (ABZM97_13130)	rsfS	2680209..2680565 (-)	357	WP_019258939.1	ribosome silencing factor	-
ABZM97_RS13135 (ABZM97_13135)	yqeK	2680583..2681143 (-)	561	WP_087990783.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ABZM97_RS13140 (ABZM97_13140)	-	2681133..2681702 (-)	570	WP_087990784.1	nicotinate-nucleotide adenylyltransferase	-
ABZM97_RS13145 (ABZM97_13145)	yhbY	2681714..2682004 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
ABZM97_RS13150 (ABZM97_13150)	aroE	2681998..2682840 (-)	843	WP_202327125.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 21844.75 Da
• Isoelectric Point: 4.5996

>NTDB_id=1022043 ABZM97_RS13115 WP_202327126.1 2677884..2678498(-) (comEA) [Bacillus vallismortis strain BL-01]
MNWLYLHKKAIILAASAAAFIAVIFVLASGENKEPVKQAVSTETENTEVKQEAVKDENDTIVIDIKGAVQHPGVYEMRTG
DRVSQAIEKAGGTGEQADEMQVNLAELLQDGIVVYIPKKGEETTMQQGFGGAVKSDGGKEAPVNINTATLEELQGISGVG
PSKAEAIIAFREENGRFQTIEELTKVSGIGEKSLEKIKSSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=1022043 ABZM97_RS13115 WP_202327126.1 2677884..2678498(-) (comEA) [Bacillus vallismortis strain BL-01]
ATGAATTGGTTGTATCTGCATAAAAAAGCAATCATTTTAGCGGCTTCTGCAGCTGCTTTCATAGCGGTTATTTTCGTTTT
GGCCAGCGGGGAAAACAAAGAGCCGGTGAAGCAGGCTGTATCAACTGAGACAGAAAATACGGAGGTAAAGCAGGAGGCGG
TAAAAGACGAGAACGATACCATTGTGATTGATATAAAGGGTGCTGTTCAGCATCCTGGCGTGTATGAAATGCGAACAGGG
GACAGAGTATCTCAGGCGATTGAGAAAGCGGGCGGGACCGGTGAACAAGCAGATGAAATGCAAGTGAATTTGGCGGAGCT
GCTGCAGGACGGGATAGTGGTGTACATCCCGAAAAAGGGAGAAGAGACAACAATGCAGCAAGGATTCGGAGGCGCTGTGA
AAAGCGATGGAGGGAAGGAAGCACCGGTAAATATCAATACAGCAACCTTAGAGGAATTACAAGGCATCTCAGGGGTGGGG
CCATCAAAGGCTGAAGCTATTATTGCATTCCGGGAAGAAAACGGGCGTTTCCAGACAATTGAAGAGCTCACTAAGGTTTC
AGGAATCGGGGAGAAGTCGCTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (140-202)

• SLBB domain (SLBB) (62-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	84.878	100	0.853
comEA	Latilactobacillus sakei subsp. sakei 23K	32.627	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae Rx1	50	72.549	0.363
comEA/celA/cilE	Streptococcus pneumoniae D39	50	72.549	0.363
comEA/celA/cilE	Streptococcus pneumoniae R6	50	72.549	0.363