Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   ABZP31_RS13595 Genome accession   NZ_CP160437
Coordinates   2889920..2890447 (-) Length   175 a.a.
NCBI ID   WP_005018049.1    Uniprot ID   A0A062BZX0
Organism   Acinetobacter sp. FL     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2884920..2895447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZP31_RS13575 (ABZP31_13575) - 2885159..2886022 (-) 864 WP_248133745.1 hypothetical protein -
  ABZP31_RS13580 (ABZP31_13580) aroB 2886030..2887115 (-) 1086 WP_005405251.1 3-dehydroquinate synthase -
  ABZP31_RS13585 (ABZP31_13585) aroK 2887134..2887685 (-) 552 WP_005018052.1 shikimate kinase AroK -
  ABZP31_RS13590 (ABZP31_13590) pilQ 2887722..2889902 (-) 2181 WP_005405252.1 type IV pilus secretin PilQ Machinery gene
  ABZP31_RS13595 (ABZP31_13595) pilP 2889920..2890447 (-) 528 WP_005018049.1 pilus assembly protein PilP Machinery gene
  ABZP31_RS13600 (ABZP31_13600) comO 2890444..2891154 (-) 711 WP_111282513.1 type 4a pilus biogenesis protein PilO Machinery gene
  ABZP31_RS13605 (ABZP31_13605) pilN 2891151..2891810 (-) 660 WP_139880691.1 PilN domain-containing protein Machinery gene
  ABZP31_RS13610 (ABZP31_13610) comM 2891810..2892868 (-) 1059 WP_119879669.1 pilus assembly protein PilM Machinery gene

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19435.61 Da        Isoelectric Point: 7.7737

>NTDB_id=1021143 ABZP31_RS13595 WP_005018049.1 2889920..2890447(-) (pilP) [Acinetobacter sp. FL]
MTWNKIILGLCCGMILVGCDSRIDAVNEEMAVIRNQPPLPIEPAPVFSPVPTFAYAAHQFRSPFLPSSLAAELKVMAGKR
VYPNFSRQPQPLESYALESLNMKGSMRNSRGQIIALIQTPDGQIEQVQRGNYMGMHHGRIVQITPTQIDLVEIIPDGREG
YVERPRSLVLIGPQP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=1021143 ABZP31_RS13595 WP_005018049.1 2889920..2890447(-) (pilP) [Acinetobacter sp. FL]
ATGACTTGGAATAAGATCATTTTAGGCCTGTGCTGCGGCATGATTCTGGTAGGCTGTGATTCACGTATAGATGCAGTAAA
TGAAGAGATGGCAGTCATTCGTAACCAGCCACCTCTACCGATTGAACCGGCACCTGTGTTCAGTCCTGTACCTACATTTG
CTTATGCAGCACATCAGTTCAGAAGTCCATTTTTACCTAGCTCGCTTGCAGCTGAGTTAAAAGTTATGGCCGGGAAGCGG
GTTTATCCGAATTTTTCACGCCAACCCCAACCTCTTGAGAGCTATGCCCTTGAATCTTTAAATATGAAAGGCAGTATGCG
TAATTCAAGAGGGCAGATTATTGCACTAATCCAGACGCCCGATGGCCAGATTGAACAAGTGCAGCGCGGGAATTATATGG
GTATGCATCATGGGCGTATTGTTCAGATTACACCTACCCAGATTGACCTGGTTGAGATCATCCCGGATGGGCGAGAAGGC
TATGTGGAACGTCCCCGCAGTCTAGTACTGATTGGGCCACAGCCTTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(28-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062BZX0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

78.857

100

0.789
  comL Acinetobacter baylyi ADP1

72.832

98.857

0.72

Multiple sequence alignment