Detailed information NTG1020997

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AB0A83_RS03970
• Genome accession: NZ_CP160405
• Coordinates: 834380..835441 (-)
• Length: 353 a.a.
• NCBI ID: WP_150046928.1
• Uniprot ID: -
• Organism: Methylomonas sp. HYX-M1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 829380..840441

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0A83_RS03945 (AB0A83_03945)	pilQ	830333..832633 (-)	2301	WP_150046921.1	type IV pilus secretin family protein	-
AB0A83_RS03950 (AB0A83_03950)	-	832647..833195 (-)	549	WP_150046923.1	pilus assembly protein PilP	-
AB0A83_RS03955 (AB0A83_03955)	-	833199..833546 (-)	348	WP_367155459.1	type 4a pilus biogenesis protein PilO	-
AB0A83_RS03960 (AB0A83_03960)	-	833443..833811 (-)	369	WP_367155460.1	type 4a pilus biogenesis protein PilO	-
AB0A83_RS03965 (AB0A83_03965)	-	833808..834380 (-)	573	WP_150046926.1	PilN domain-containing protein	-
AB0A83_RS03970 (AB0A83_03970)	pilM	834380..835441 (-)	1062	WP_150046928.1	pilus assembly protein PilM	Machinery gene
AB0A83_RS03975 (AB0A83_03975)	-	835757..838129 (+)	2373	WP_367155461.1	penicillin-binding protein 1A	-
AB0A83_RS03980 (AB0A83_03980)	rpmE	838193..838393 (-)	201	WP_150046932.1	50S ribosomal protein L31	-
AB0A83_RS03985 (AB0A83_03985)	-	838487..839842 (-)	1356	WP_367155463.1	MFS transporter	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 38220.80 Da
• Isoelectric Point: 4.8018

>NTDB_id=1020997 AB0A83_RS03970 WP_150046928.1 834380..835441(-) (pilM) [Methylomonas sp. HYX-M1]
MSWFNRSQAALLGIDISTAAVKLLELSRTGARYKVESYAVAPLPQDAVIDKNITNVEVIGEAIKAAARQSGTRAKRACVA
VAGSSVMTKIITMPASLTEADMEEQIMVEADQYIPYSLDEVNLDFEVQGPSKSNPEMLDVLLAASRRENIEDRVAALNYA
GLKAAIVDVEAFAMENAFTLLVDQLPENMANKTVAIADVGATLTSLNILHNGKTIYTREQGFGGKQLTEEIQRRYGLSYE
EAGLAKRHGGLPDNYIPDVLEPFKKAMLQQIARSLQFFVSSSANRGIDALILAGGCASIPGLEKLVERDLGLSSYIANPF
INMALSNRVKPQNLSNDTPAMMIACGLALRSFD

Nucleotide

• Length: 1062 bp

>NTDB_id=1020997 AB0A83_RS03970 WP_150046928.1 834380..835441(-) (pilM) [Methylomonas sp. HYX-M1]
ATGAGCTGGTTTAACAGGAGTCAGGCCGCTTTACTCGGCATAGACATTAGCACTGCAGCCGTCAAACTGTTGGAATTGAG
TCGGACGGGCGCGCGCTATAAAGTCGAGAGTTACGCTGTCGCTCCTCTGCCACAAGACGCCGTGATCGACAAAAACATTA
CCAATGTCGAAGTAATAGGCGAAGCGATCAAAGCTGCGGCCAGACAATCCGGCACCCGTGCGAAACGCGCTTGCGTCGCG
GTAGCTGGTTCCTCGGTGATGACCAAAATCATCACCATGCCAGCCTCCCTGACCGAGGCCGACATGGAAGAACAAATCAT
GGTCGAAGCCGATCAATACATTCCTTATTCGCTGGACGAAGTGAATTTGGATTTCGAAGTACAAGGCCCGTCCAAAAGTA
ATCCGGAAATGCTCGATGTGCTGCTGGCCGCTTCCAGACGCGAAAACATAGAGGATAGAGTAGCGGCGTTGAATTACGCC
GGATTGAAAGCTGCCATCGTAGACGTGGAAGCGTTTGCAATGGAAAACGCGTTTACCTTGTTGGTCGATCAATTACCCGA
AAACATGGCCAATAAAACCGTTGCGATTGCCGACGTCGGCGCAACCCTGACTTCGCTGAACATCTTGCACAACGGCAAAA
CCATTTACACGCGGGAACAGGGCTTCGGCGGCAAACAACTGACCGAAGAAATCCAACGCCGTTACGGCTTGTCTTACGAA
GAAGCCGGTTTGGCGAAACGGCACGGCGGCTTGCCGGACAATTACATTCCCGACGTGTTGGAGCCTTTTAAAAAGGCCAT
GTTGCAACAAATCGCCCGCTCGCTGCAGTTCTTCGTATCCTCCAGCGCCAACCGCGGCATAGACGCTTTAATTTTAGCCG
GTGGTTGCGCATCGATTCCGGGCCTGGAAAAACTGGTTGAACGGGACTTGGGTTTGTCGTCGTACATCGCCAACCCGTTT
ATCAACATGGCGTTATCCAACAGAGTCAAGCCGCAAAACTTGAGTAACGATACCCCGGCGATGATGATCGCTTGCGGTCT
GGCCTTGAGGAGTTTCGACTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	50.142	100	0.501
comM	Acinetobacter nosocomialis M2	50.142	100	0.501
comM	Acinetobacter baylyi ADP1	47.875	100	0.479
pilM	Legionella pneumophila strain ERS1305867	41.36	100	0.414