Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   ABZ559_RS06945 Genome accession   NZ_CP160400
Coordinates   1355646..1356947 (+) Length   433 a.a.
NCBI ID   WP_367005676.1    Uniprot ID   -
Organism   Streptococcus sp. ZY19097     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1350646..1361947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZ559_RS06930 (ABZ559_06930) mmuM 1350761..1351711 (+) 951 WP_367005674.1 homocysteine S-methyltransferase -
  ABZ559_RS06935 (ABZ559_06935) - 1352250..1354796 (+) 2547 WP_367005675.1 M1 family metallopeptidase -
  ABZ559_RS06940 (ABZ559_06940) ciaR 1354982..1355656 (+) 675 WP_018375408.1 response regulator transcription factor Regulator
  ABZ559_RS06945 (ABZ559_06945) ciaH 1355646..1356947 (+) 1302 WP_367005676.1 HAMP domain-containing sensor histidine kinase Regulator
  ABZ559_RS06950 (ABZ559_06950) rpsT 1357167..1357418 (-) 252 WP_074486519.1 30S ribosomal protein S20 -
  ABZ559_RS06955 (ABZ559_06955) coaA 1357472..1358392 (-) 921 WP_018375410.1 type I pantothenate kinase -
  ABZ559_RS06960 (ABZ559_06960) - 1358661..1359251 (+) 591 WP_367005677.1 class I SAM-dependent methyltransferase -
  ABZ559_RS06965 (ABZ559_06965) - 1359248..1360525 (+) 1278 WP_367005678.1 pyrimidine-nucleoside phosphorylase -
  ABZ559_RS06970 (ABZ559_06970) deoC 1360543..1361202 (+) 660 WP_018375413.1 deoxyribose-phosphate aldolase -
  ABZ559_RS06975 (ABZ559_06975) - 1361189..1361578 (+) 390 WP_018375414.1 cytidine deaminase -

Sequence

Protein


Download         Length: 433 a.a.        Molecular weight: 49116.14 Da        Isoelectric Point: 7.4520

>NTDB_id=1020937 ABZ559_RS06945 WP_367005676.1 1355646..1356947(+) (ciaH) [Streptococcus sp. ZY19097]
MLNRLRKRLASETFTHFFHFFAVFTSIFVIMTTIILQIMRYGVYSSVDTRLQEAVNSYESYVNMALARIFSVETDGDGIT
FKFDPGKKPNYKVSNIDVLLYDKEGNLLNTVDAYAQFGTVSLDTSKLNEIVDGQLQTSFGQKEKFHYVTIKVSSSDYPSV
KYATFLVNVSQLDEANDRFITITISVMVVFWIISVAASVYLAKWSRKPILESYEKQKSFVENASHELRTPLAVLQNRLES
LFRKPNSTILDNSESIAASLDEVRNMRLLTTNLLNLARRDDGLNPEIEDIVPNFIDDIFENYNMIAEDSGKTFIGKNQTN
RTFKSDKTLLKQLMTILFDNAIKYTGDDGEIIFTVKTTDKQLILQVADNGPGIANEDKKKIFDRFYRVDKARTRQSGGFG
LGLSLAQQIVHSLKGTIVVKDNTPKGTIFEVKL

Nucleotide


Download         Length: 1302 bp        

>NTDB_id=1020937 ABZ559_RS06945 WP_367005676.1 1355646..1356947(+) (ciaH) [Streptococcus sp. ZY19097]
ATGCTGAATAGATTGAGAAAGCGTTTAGCTTCTGAAACATTTACCCATTTCTTTCATTTCTTTGCTGTATTTACAAGTAT
TTTTGTCATTATGACTACCATTATTCTGCAAATTATGCGTTATGGGGTTTATTCGTCGGTTGATACACGTTTACAAGAAG
CAGTGAATTCATATGAATCTTATGTTAATATGGCTTTGGCACGTATCTTTTCGGTTGAAACGGATGGAGATGGCATAACT
TTTAAATTCGATCCCGGTAAGAAACCTAACTATAAGGTTAGTAATATTGATGTTTTACTTTATGACAAAGAAGGCAATCT
TTTAAACACTGTCGATGCTTACGCGCAATTTGGGACTGTTTCTTTGGATACCAGTAAATTAAATGAGATTGTTGATGGCC
AACTTCAGACAAGTTTTGGACAGAAAGAAAAATTTCATTATGTGACAATTAAGGTAAGTAGTAGTGACTACCCCAGTGTA
AAATATGCCACATTTCTTGTTAATGTAAGCCAATTAGATGAGGCAAATGATCGTTTTATCACTATTACGATTAGCGTAAT
GGTAGTGTTTTGGATTATTTCAGTTGCCGCTAGCGTTTATCTAGCAAAATGGTCTCGAAAACCGATTTTAGAAAGTTATG
AAAAACAAAAATCCTTTGTCGAAAATGCTAGTCACGAATTAAGGACACCATTGGCTGTTTTGCAAAATCGTTTAGAAAGT
TTGTTTAGAAAGCCAAATTCAACCATTTTAGACAACAGCGAGAGCATTGCAGCAAGTTTAGACGAGGTTCGGAATATGCG
CTTGCTAACAACGAATCTTTTAAATCTTGCTAGGCGTGATGATGGTCTAAATCCAGAAATTGAAGATATTGTTCCAAATT
TCATTGATGATATTTTTGAAAATTATAATATGATTGCTGAGGATAGTGGAAAAACATTTATTGGAAAAAATCAAACTAAT
CGAACCTTTAAATCTGATAAGACGCTACTAAAACAACTGATGACTATTCTATTTGATAATGCTATCAAATATACAGGGGA
CGATGGTGAAATTATTTTTACTGTTAAAACAACGGATAAGCAATTGATTTTACAAGTTGCTGATAATGGTCCTGGCATTG
CAAATGAAGATAAAAAGAAAATTTTCGATCGTTTTTACCGCGTTGATAAGGCGAGGACACGCCAGAGTGGAGGATTTGGT
CTAGGGTTATCACTGGCTCAGCAAATTGTTCACTCATTAAAAGGGACGATTGTTGTTAAGGATAATACTCCTAAGGGAAC
TATATTTGAGGTAAAATTATAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(217-282)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(326-433)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

60.369

100

0.605
  ciaH Streptococcus pneumoniae Rx1

51.945

100

0.524
  ciaH Streptococcus pneumoniae D39

51.945

100

0.524
  ciaH Streptococcus pneumoniae R6

51.945

100

0.524
  ciaH Streptococcus pneumoniae TIGR4

51.945

100

0.524

Multiple sequence alignment