Detailed information NTG1020896

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABZN20_RS15160
• Genome accession: NZ_CP160399
• Coordinates: 3113339..3114400 (+)
• Length: 353 a.a.
• NCBI ID: WP_218807941.1
• Uniprot ID: -
• Organism: Methylococcus sp. ANG
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3108339..3119400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZN20_RS15135 (ABZN20_15135)	-	3108777..3109550 (-)	774	WP_367025788.1	exodeoxyribonuclease III	-
ABZN20_RS15140 (ABZN20_15140)	rpmE	3109685..3109888 (+)	204	WP_218807944.1	50S ribosomal protein L31	-
ABZN20_RS15145 (ABZN20_15145)	-	3109951..3110550 (-)	600	WP_255556599.1	hypothetical protein	-
ABZN20_RS15150 (ABZN20_15150)	-	3110566..3113115 (-)	2550	WP_367025789.1	penicillin-binding protein 1A	-
ABZN20_RS15155 (ABZN20_15155)	-	3113161..3113340 (-)	180	WP_367025790.1	hypothetical protein	-
ABZN20_RS15160 (ABZN20_15160)	pilM	3113339..3114400 (+)	1062	WP_218807941.1	pilus assembly protein PilM	Machinery gene
ABZN20_RS15165 (ABZN20_15165)	-	3114400..3115005 (+)	606	WP_218807940.1	PilN domain-containing protein	-
ABZN20_RS15170 (ABZN20_15170)	-	3115002..3115643 (+)	642	WP_218807939.1	type 4a pilus biogenesis protein PilO	-
ABZN20_RS15175 (ABZN20_15175)	-	3115643..3116194 (+)	552	WP_255556598.1	pilus assembly protein PilP	-
ABZN20_RS15180 (ABZN20_15180)	-	3116262..3118367 (+)	2106	WP_255556597.1	type IV pilus secretin PilQ	-
ABZN20_RS15185 (ABZN20_15185)	aroK	3118431..3118970 (+)	540	WP_367025791.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 38421.83 Da
• Isoelectric Point: 4.9350

>NTDB_id=1020896 ABZN20_RS15160 WP_218807941.1 3113339..3114400(+) (pilM) [Methylococcus sp. ANG]
MWGFGRKKPLLLGIDISAAAVKLLELSRKNGGYQVESYGVVPLPRNTVVDNTIAEPDNVSAAVRAVVKQSGTPLRHAVVA
VPGSVVITKRITMPASLGGDELEAQIELEADQYIPHAREEVSLDFEVLGKSSKNPDLVDVLLVATRRENVEDRVSVLENA
GLGVEIVDVESYAIERAFEMVRDQLPPPLRDRAVAVADVGAMATTLNVIHGGSIIYTREQGFGGMQLTDEIQRRYGLTHE
EAGLAKKEGSLPGNYAEEVLEPFKHALVQQISRSFQFYLSSTAQRGFDAVVLAGGCAMIPEIDRYVEAALQVPTVVANPF
RNMSFSGRVRQERLNYDSSALMLACGLALRSFD

Nucleotide

• Length: 1062 bp

>NTDB_id=1020896 ABZN20_RS15160 WP_218807941.1 3113339..3114400(+) (pilM) [Methylococcus sp. ANG]
ATGTGGGGCTTCGGAAGAAAGAAACCGCTCCTGCTGGGGATCGACATCAGCGCGGCGGCGGTCAAGCTGCTCGAGCTGAG
CCGAAAGAACGGCGGCTACCAGGTGGAAAGTTACGGCGTCGTGCCGTTGCCCCGGAACACGGTGGTCGACAACACGATCG
CCGAGCCGGACAACGTGTCGGCGGCGGTACGGGCCGTGGTCAAACAGTCGGGGACTCCGCTCCGGCACGCGGTGGTCGCG
GTGCCCGGCTCGGTGGTCATCACCAAGCGCATCACCATGCCCGCCAGCCTGGGGGGCGACGAACTCGAGGCGCAAATCGA
ATTGGAGGCGGACCAGTACATCCCCCATGCGAGGGAGGAGGTCAGCCTGGATTTCGAGGTGCTGGGAAAGAGCTCGAAGA
ATCCCGATCTGGTGGACGTGCTTCTGGTGGCTACGCGCCGGGAAAACGTGGAAGACCGGGTTTCGGTGCTGGAAAACGCG
GGCCTCGGCGTCGAGATCGTCGACGTGGAGTCCTACGCCATCGAACGCGCCTTCGAGATGGTCAGGGACCAGCTTCCGCC
GCCCCTCCGCGACCGGGCGGTAGCCGTGGCCGATGTGGGCGCCATGGCCACCACGCTCAACGTCATCCACGGCGGTTCCA
TCATCTACACCCGGGAACAGGGCTTCGGCGGCATGCAGTTGACCGACGAGATTCAGCGCCGCTACGGCCTGACCCACGAG
GAAGCGGGGCTGGCGAAGAAGGAAGGGAGCCTTCCCGGCAACTATGCCGAGGAAGTGCTGGAACCGTTCAAACACGCTTT
GGTTCAGCAGATCAGCCGTTCGTTCCAGTTCTATCTGTCGTCCACCGCTCAGCGCGGCTTCGACGCGGTGGTGCTGGCCG
GCGGCTGCGCCATGATTCCGGAAATCGACCGTTACGTAGAGGCGGCGTTGCAGGTTCCCACCGTCGTTGCGAATCCCTTC
CGTAACATGAGTTTTTCGGGGAGGGTCCGGCAGGAGCGCCTGAATTACGATTCCTCGGCCCTGATGCTGGCCTGCGGCCT
GGCGCTGCGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.895	97.167	0.504
comM	Acinetobacter nosocomialis M2	51.312	97.167	0.499
comM	Acinetobacter baylyi ADP1	48.857	99.15	0.484
pilM	Legionella pneumophila strain ERS1305867	43.023	97.45	0.419