Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AB0R82_RS12360 | Genome accession | NZ_CP160220 |
| Coordinates | 2417685..2418722 (-) | Length | 345 a.a. |
| NCBI ID | WP_044052501.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain JM553 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2412685..2423722
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0R82_RS12310 (AB0R82_12310) | tasA | 2412783..2413568 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| AB0R82_RS12315 (AB0R82_12315) | sipW | 2413632..2414204 (-) | 573 | WP_072692741.1 | signal peptidase I SipW | - |
| AB0R82_RS12320 (AB0R82_12320) | tapA | 2414188..2414949 (-) | 762 | WP_198878634.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AB0R82_RS12325 (AB0R82_12325) | yqzG | 2415221..2415547 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| AB0R82_RS12330 (AB0R82_12330) | spoIITA | 2415589..2415768 (-) | 180 | WP_072175549.1 | YqzE family protein | - |
| AB0R82_RS12335 (AB0R82_12335) | comGG | 2415839..2416213 (-) | 375 | WP_133953114.1 | ComG operon protein ComGG | Machinery gene |
| AB0R82_RS12340 (AB0R82_12340) | comGF | 2416214..2416597 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| AB0R82_RS12345 (AB0R82_12345) | comGE | 2416623..2416970 (-) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| AB0R82_RS12350 (AB0R82_12350) | comGD | 2416954..2417385 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| AB0R82_RS12355 (AB0R82_12355) | comGC | 2417375..2417671 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AB0R82_RS12360 (AB0R82_12360) | comGB | 2417685..2418722 (-) | 1038 | WP_044052501.1 | comG operon protein ComGB | Machinery gene |
| AB0R82_RS12365 (AB0R82_12365) | comGA | 2418709..2419779 (-) | 1071 | WP_129134318.1 | competence protein ComGA | Machinery gene |
| AB0R82_RS12370 (AB0R82_12370) | - | 2419991..2420188 (-) | 198 | WP_129134319.1 | hypothetical protein | - |
| AB0R82_RS12375 (AB0R82_12375) | corA | 2420190..2421143 (-) | 954 | WP_198878633.1 | magnesium transporter CorA | - |
| AB0R82_RS12380 (AB0R82_12380) | yqhB | 2421286..2422611 (+) | 1326 | WP_198878632.1 | hemolysin family protein | - |
| AB0R82_RS12385 (AB0R82_12385) | rsbRD | 2422668..2423504 (-) | 837 | WP_015714260.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39746.21 Da Isoelectric Point: 9.6257
>NTDB_id=1019702 AB0R82_RS12360 WP_044052501.1 2417685..2418722(-) (comGB) [Bacillus subtilis strain JM553]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1019702 AB0R82_RS12360 WP_044052501.1 2417685..2418722(-) (comGB) [Bacillus subtilis strain JM553]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.69 |
93.623 |
0.933 |