Detailed information NTG1019343

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R81_RS16925
• Genome accession: NZ_CP160215
• Coordinates: 3432969..3434132 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JJ213
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3427969..3439132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R81_RS16895 (AB0R81_16895)	-	3428234..3428653 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
AB0R81_RS16900 (AB0R81_16900)	comFC	3428727..3429416 (-)	690	WP_204565382.1	double zinc ribbon domain-containing protein	Machinery gene
AB0R81_RS16905 (AB0R81_16905)	-	3429422..3429706 (-)	285	WP_007407481.1	competence protein ComFB	-
AB0R81_RS16910 (AB0R81_16910)	comFA	3429760..3431148 (-)	1389	WP_122504228.1	DEAD/DEAH box helicase	Machinery gene
AB0R81_RS16915 (AB0R81_16915)	-	3431257..3432105 (-)	849	WP_003151387.1	DegV family protein	-
AB0R81_RS16920 (AB0R81_16920)	degU	3432203..3432892 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R81_RS16925 (AB0R81_16925)	degS	3432969..3434132 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R81_RS16930 (AB0R81_16930)	-	3434355..3435002 (+)	648	WP_061581228.1	YigZ family protein	-
AB0R81_RS16935 (AB0R81_16935)	-	3435007..3436242 (+)	1236	WP_025285355.1	LCP family protein	-
AB0R81_RS16940 (AB0R81_16940)	-	3436341..3437417 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R81_RS16945 (AB0R81_16945)	-	3437550..3438746 (-)	1197	WP_094031330.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1019343 AB0R81_RS16925 WP_007407484.1 3432969..3434132(-) (degS) [Bacillus velezensis strain JJ213]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1019343 AB0R81_RS16925 WP_007407484.1 3432969..3434132(-) (degS) [Bacillus velezensis strain JJ213]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951