Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   DQM73_RS00625 Genome accession   NZ_LS483346
Coordinates   110831..111271 (-) Length   146 a.a.
NCBI ID   WP_002926373.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC11085     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 105831..116271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM73_RS00610 (NCTC11085_00117) argR 107250..107687 (+) 438 WP_002902018.1 arginine repressor -
  DQM73_RS00615 (NCTC11085_00118) hexA 107766..110315 (+) 2550 WP_002926375.1 DNA mismatch repair protein MutS Machinery gene
  DQM73_RS00620 (NCTC11085_00119) - 110364..110834 (-) 471 WP_002926374.1 DUF3021 family protein -
  DQM73_RS00625 (NCTC11085_00120) brsR 110831..111271 (-) 441 WP_002926373.1 LytTR family DNA-binding domain-containing protein Regulator
  DQM73_RS00630 (NCTC11085_00121) hexB 111460..113406 (+) 1947 WP_032908260.1 DNA mismatch repair endonuclease MutL Machinery gene
  DQM73_RS00635 (NCTC11085_00122) - 113442..113963 (-) 522 WP_002926371.1 RDD family protein -
  DQM73_RS00640 (NCTC11085_00123) - 113947..114453 (-) 507 WP_002908492.1 helix-turn-helix domain-containing protein -
  DQM73_RS00645 (NCTC11085_00124) ruvA 114623..115213 (+) 591 WP_032908259.1 Holliday junction branch migration protein RuvA Machinery gene
  DQM73_RS00650 (NCTC11085_00125) - 115224..115796 (+) 573 WP_002908494.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17283.92 Da        Isoelectric Point: 9.8732

>NTDB_id=1019030 DQM73_RS00625 WP_002926373.1 110831..111271(-) (brsR) [Streptococcus sanguinis strain NCTC11085]
MKVKLRIDSQVTEDSVSIEARLMTESIQELVHFAQHLGKKDKIHVKKEDEIYLLDTKEIHRIYTENRQIQVRTAKDSYRA
QQALYQLLQVLPEYFLQISQSEIINSRQISHLKLTPNGLIQIFLKNGDQTYSSRRYLKSIKERLQL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=1019030 DQM73_RS00625 WP_002926373.1 110831..111271(-) (brsR) [Streptococcus sanguinis strain NCTC11085]
ATGAAAGTTAAGCTAAGAATCGATTCTCAAGTCACCGAGGACTCCGTCAGCATTGAGGCTCGCCTCATGACAGAAAGTAT
TCAGGAATTGGTCCACTTTGCTCAACATCTAGGCAAAAAAGACAAGATTCATGTCAAGAAAGAGGACGAAATCTATCTGC
TGGATACTAAGGAAATCCACCGAATCTATACAGAAAACCGCCAGATTCAGGTTCGAACAGCAAAAGACAGCTATCGAGCT
CAACAAGCTCTTTATCAATTGCTGCAGGTCCTACCGGAATATTTCCTGCAGATTTCTCAGTCGGAGATTATCAATAGCAG
GCAAATCAGCCACCTCAAGCTGACTCCAAATGGTCTGATTCAAATATTTCTGAAAAACGGCGATCAGACTTACTCGTCCC
GCCGTTATCTCAAATCCATTAAAGAAAGGTTGCAATTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(49-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.301

100

0.363