Detailed information NTG1018880

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABX013_RS02465
• Genome accession: NZ_CP160207
• Coordinates: 591715..592893 (+)
• Length: 392 a.a.
• NCBI ID: WP_370578619.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Amel04
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 586715..597893

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABX013_RS02445 (ABX013_10955)	-	587699..588928 (+)	1230	WP_100125703.1	PilT/PilU family type 4a pilus ATPase	-
ABX013_RS02450 (ABX013_10950)	murU	589060..589761 (+)	702	WP_084584953.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
ABX013_RS02455 (ABX013_10945)	ruvC	589892..590443 (+)	552	WP_369432843.1	crossover junction endodeoxyribonuclease RuvC	-
ABX013_RS02460 (ABX013_17005)	-	590548..591333 (-)	786	WP_371751724.1	DUF2071 domain-containing protein	-
ABX013_RS02465 (ABX013_10930)	dprA	591715..592893 (+)	1179	WP_370578619.1	DNA-processing protein DprA	Machinery gene
ABX013_RS02470 (ABX013_10920)	-	592905..593363 (+)	459	WP_025329887.1	DUF494 family protein	-
ABX013_RS02475 (ABX013_10910)	topA	593505..595799 (+)	2295	WP_371751725.1	type I DNA topoisomerase	-
ABX013_RS02480 (ABX013_10905)	rsmD	595878..596450 (+)	573	WP_279037229.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABX013_RS02485 (ABX013_10900)	-	596542..596796 (+)	255	WP_037392355.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42159.16 Da
• Isoelectric Point: 6.4947

>NTDB_id=1018880 ABX013_RS02465 WP_370578619.1 591715..592893(+) (dprA) [Snodgrassella alvi strain Amel04]
MDTQERLAWIELALTPFVGAETFLRIIKYFGSAQNALSASAAEISPFCQRQVSKYWHSDVAKQATEAAIEWEQAHTDARL
LLLADNDFPAMLTKGLTPPPLLFVRGDSQCLHQPALSIVGSRHATPQAMRITRDFAAALAHKGVTIISGMASGADTAAHQ
GALQAMGTTVAVWGTGIDRVYPARNKNLATQIAAHGCIISEFPLATRPSPGNFPRRNRLIAALSQGTLVVEAATESGSLI
TARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLEDILQECPRLLQKKDLQSYSNRPHLQTDDISKSSTNTDS
SEDSLSVHSPDCILNPMEQQVLDGLGYGIMHPDMLVTALGMAATDVYAHLVTLELGGWITTLPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=1018880 ABX013_RS02465 WP_370578619.1 591715..592893(+) (dprA) [Snodgrassella alvi strain Amel04]
ATGGATACTCAAGAACGCCTAGCCTGGATTGAATTGGCATTAACTCCGTTTGTGGGTGCTGAAACTTTTCTTCGCATAAT
TAAATATTTTGGTTCAGCACAAAATGCTCTTAGTGCATCGGCTGCTGAAATATCGCCTTTTTGTCAACGGCAAGTCAGTA
AGTATTGGCATAGTGATGTAGCAAAACAGGCAACTGAAGCAGCTATAGAATGGGAGCAAGCGCATACTGATGCACGTTTA
TTACTACTGGCAGATAATGATTTTCCGGCAATGCTGACCAAGGGTTTAACACCGCCTCCATTATTGTTTGTTCGTGGTGA
TAGCCAGTGTTTGCATCAACCCGCTTTATCAATTGTTGGCAGTCGGCATGCTACACCACAAGCCATGCGCATTACTCGTG
ATTTTGCTGCTGCGCTGGCTCACAAAGGTGTAACAATTATTTCAGGTATGGCTAGTGGCGCAGATACAGCAGCACATCAG
GGTGCTTTGCAGGCAATGGGTACAACAGTGGCAGTTTGGGGTACAGGTATTGACAGAGTATATCCGGCACGTAACAAAAA
TTTAGCCACACAAATTGCTGCTCATGGCTGTATTATTTCTGAATTTCCCTTGGCTACTCGTCCTTCGCCCGGAAATTTTC
CGCGACGTAACCGCTTGATTGCTGCACTTAGTCAGGGTACGCTGGTAGTTGAAGCTGCAACTGAATCGGGCTCATTGATT
ACTGCAAGATTGGCTGGCGAAATGGGGCGGGAAGTTATGGCGATACCGGGTTCTATTGATAACCCTTTAAGTAAAGGCTG
CCACGCATTAATCAAACAGGGTGCCAAATTAGTAGAAAATCTGGAAGATATTTTGCAGGAATGTCCACGCCTCTTGCAAA
AAAAAGATTTGCAATCATATAGCAATCGTCCTCATCTGCAAACTGATGATATAAGTAAATCATCTACAAATACTGATAGT
TCAGAAGATTCATTATCAGTTCATTCACCAGATTGTATACTTAACCCGATGGAGCAGCAGGTGCTGGACGGACTGGGTTA
CGGCATAATGCATCCGGATATGTTAGTTACAGCACTTGGCATGGCTGCTACAGATGTGTATGCTCATCTCGTGACATTGG
AGCTTGGTGGCTGGATTACCACTCTGCCAGGCGGCTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (334-385)

• DNA recombination-mediator protein A (DNA_processg_A) (76-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.04	100	0.589
dprA	Neisseria meningitidis MC58	58.04	100	0.589
dprA	Neisseria gonorrhoeae strain FA1090	56.543	100	0.584
dprA	Neisseria gonorrhoeae MS11	56.296	100	0.582