Detailed information NTG1018855

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABXR98_RS03060
• Genome accession: NZ_CP160206
• Coordinates: 630905..632086 (-)
• Length: 393 a.a.
• NCBI ID: WP_374695106.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Amel03
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 625905..637086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXR98_RS03040 (ABXR98_00835)	-	627002..627256 (-)	255	WP_037392355.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ABXR98_RS03045 (ABXR98_00830)	rsmD	627348..627920 (-)	573	WP_025329889.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABXR98_RS03050 (ABXR98_00825)	topA	627999..630293 (-)	2295	WP_084586036.1	type I DNA topoisomerase	-
ABXR98_RS03055 (ABXR98_00820)	-	630435..630893 (-)	459	WP_025329887.1	DUF494 family protein	-
ABXR98_RS03060 (ABXR98_00815)	dprA	630905..632086 (-)	1182	WP_374695106.1	DNA-processing protein DprA	Machinery gene
ABXR98_RS03065 (ABXR98_00810)	-	632994..633293 (+)	300	WP_037476179.1	DUF6694 family lipoprotein	-
ABXR98_RS03070 (ABXR98_17625)	-	634001..635014 (+)	1014	WP_374695107.1	3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein	-
ABXR98_RS03075 (ABXR98_17630)	-	635011..636018 (+)	1008	WP_174829721.1	NAD(P)-dependent oxidoreductase	-
ABXR98_RS03080 (ABXR98_17635)	-	636019..636825 (+)	807	WP_174829720.1	MBL fold metallo-hydrolase	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 42283.24 Da
• Isoelectric Point: 6.5578

>NTDB_id=1018855 ABXR98_RS03060 WP_374695106.1 630905..632086(-) (dprA) [Snodgrassella alvi strain Amel03]
MDTQERLAWIELALTPFVGAETFLRIIKYFGSAQNALSASAAEVTPFFHHQQASKYWHSKIAKQATEGALEWEQAHSDAR
LLLLVDNDFPAMLTNGLTPPPLLFVRGDSQCLHQPALSIVGSRHATPQAMRITRDFAAALAQKGVTIISGMASGADTAAH
QGALQAMGTTVAVWGTGIDRVYPARNKNLATQIAAHGCIISEFPLATRPSPGNFPRRNRLIAALSQGTLVVEAATESGSL
ITARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLEDILQECPRLLQKKDLQSYSNRPHLQTDDVSKSSTNTD
SSEDSLSVHSPDCILNPMEQQVLDGLGYGIMHPDMLVTALGMAATDVYAHLVTLELGGWITTLPGGCYQRIKS

Nucleotide

• Length: 1182 bp

>NTDB_id=1018855 ABXR98_RS03060 WP_374695106.1 630905..632086(-) (dprA) [Snodgrassella alvi strain Amel03]
ATGGATACACAAGAACGCCTTGCCTGGATTGAATTGGCATTGACTCCGTTTGTTGGTGCTGAAACTTTTCTTCGTATAAT
TAAATATTTTGGTTCTGCACAAAATGCTCTGAGTGCATCTGCTGCTGAAGTAACTCCTTTTTTTCATCATCAGCAAGCCA
GTAAATATTGGCACAGTAAAATAGCTAAACAGGCAACAGAAGGTGCTTTAGAGTGGGAGCAGGCGCATTCTGATGCACGT
TTATTATTACTGGTAGATAATGATTTTCCGGCAATGTTAACTAATGGATTGACGCCGCCACCATTATTGTTTGTTCGTGG
TGATAGCCAGTGTTTGCATCAACCTGCTTTATCAATTGTTGGTAGTCGGCATGCTACTCCACAAGCCATGCGCATTACTC
GTGATTTTGCTGCTGCGCTGGCTCAGAAAGGTGTAACAATTATTTCAGGTATGGCTAGTGGCGCAGATACAGCAGCACAT
CAGGGTGCTTTGCAGGCGATGGGTACAACAGTGGCAGTTTGGGGTACAGGTATTGACAGAGTATATCCGGCACGTAACAA
AAATTTAGCCACACAAATTGCTGCTCATGGCTGTATTATTTCTGAATTTCCCTTGGCTACTCGTCCTTCGCCCGGAAATT
TTCCGCGACGTAACCGCTTGATTGCTGCACTTAGTCAGGGTACGCTGGTAGTTGAAGCCGCAACTGAATCGGGCTCATTG
ATTACTGCAAGACTGGCTGGAGAAATGGGGCGGGAAGTTATGGCGATACCGGGTTCTATTGATAACCCTTTAAGTAAAGG
CTGTCACGCATTAATCAAACAGGGTGCCAAATTAGTAGAAAATCTGGAAGATATTTTGCAGGAATGTCCACGCCTCTTGC
AAAAAAAAGATTTGCAATCATATAGCAATCGTCCTCATCTGCAAACTGATGATGTAAGTAAATCATCTACAAATACTGAT
AGTTCAGAAGATTCATTATCAGTTCATTCACCAGATTGTATACTTAACCCGATGGAGCAGCAGGTGCTGGACGGACTGGG
TTACGGCATAATGCATCCGGATATGTTAGTTACAGCACTTGGCATGGCTGCTACAGATGTGTATGCTCATCTCGTGACAT
TGGAGCTTGGTGGCTGGATTACCACTCTGCCAGGCGGTTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (335-386)

• DNA recombination-mediator protein A (DNA_processg_A) (77-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.543	100	0.593
dprA	Neisseria meningitidis MC58	58.543	100	0.593
dprA	Neisseria gonorrhoeae strain FA1090	57.037	100	0.588
dprA	Neisseria gonorrhoeae MS11	56.79	100	0.585