Detailed information NTG1018077

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQL28_RS03335
• Genome accession: NZ_LS483334
• Coordinates: 643367..644329 (+)
• Length: 320 a.a.
• NCBI ID: WP_002995771.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12050
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 638367..649329

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL28_RS09670 (NCTC12050_00645)	-	638372..638665 (+)	294	WP_306460904.1	hypothetical protein	-
DQL28_RS09675 (NCTC12050_00646)	-	638690..638962 (+)	273	WP_281727591.1	hypothetical protein	-
DQL28_RS03315 (NCTC12050_00647)	-	639076..640296 (-)	1221	WP_002983986.1	DUF3114 domain-containing protein	-
DQL28_RS03320 (NCTC12050_00648)	queA	640303..641331 (-)	1029	WP_030126962.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
DQL28_RS03325 (NCTC12050_00649)	nagB	641533..642282 (+)	750	WP_111676266.1	glucosamine-6-phosphate deaminase	-
DQL28_RS03330 (NCTC12050_00650)	-	642356..643072 (+)	717	WP_032462853.1	pseudouridine synthase	-
DQL28_RS03335 (NCTC12050_00651)	coiA	643367..644329 (+)	963	WP_002995771.1	competence protein CoiA	Machinery gene
DQL28_RS03340 (NCTC12050_00652)	pepF	644342..646147 (+)	1806	WP_020837346.1	oligoendopeptidase F	Regulator
DQL28_RS03345 (NCTC12050_00653)	-	646523..647719 (+)	1197	WP_111676267.1	OFA family MFS transporter	-
DQL28_RS03350 (NCTC12050_00654)	-	647785..648492 (+)	708	WP_002984000.1	O-methyltransferase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37748.20 Da
• Isoelectric Point: 10.2013

>NTDB_id=1018077 DQL28_RS03335 WP_002995771.1 643367..644329(+) (coiA) [Streptococcus pyogenes strain NCTC12050]
MTKILTALDGKNQLISLVTQPISTKPPFCCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLV
RTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKRTKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSS
SLGFHLWELDAAANLLRLKYLIHEDLFGKVSYLTKTISLDHNIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHP
KWLRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKKVQTLFSPKYYVKMDSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=1018077 DQL28_RS03335 WP_002995771.1 643367..644329(+) (coiA) [Streptococcus pyogenes strain NCTC12050]
GTGACAAAAATATTAACCGCTTTAGATGGTAAGAATCAGCTCATTTCGCTAGTAACTCAGCCTATTTCAACGAAACCGCC
TTTTTGTTGCCCAGCTTGCAAATCTCCTGTTCGCTTGCGTCAGGGGACAATTAGACGACCTCATTTTGCCCATGTACAAC
TAGCTCATTGTCAATTCCAAGCAGAAAATGAATCTGAGGAACATTTGACGTTGAAGGCAAAACTTTACACCAGTTTAGTC
CGAACAGAAGCTGTCTGTATTGAAAAATATCTTCCTGAGCTGCAACAGATAGCAGACCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGTCCCTTGCCAGTTGAGCGTCTAAAGAAACGCACCAAAGCCTATCAAGAAAAGGGGTATCCGG
TACGATGGTTACTGGGAAGAAAATTGTGGCTTAACACTCACTTAACTGCTTTGCAAAAACAGTTTCTTTACTTTTCATCT
AGTTTGGGCTTTCATTTGTGGGAGCTGGATGCAGCTGCAAATCTGCTACGTCTCAAATATTTAATCCATGAAGACTTATT
TGGTAAGGTAAGTTACCTTACCAAAACCATTTCTTTAGACCACAATATTATGGAAATGTTTCGATTACCCTATCAGCAAG
AAATCCTTTATTCTTATCAGAAAAAAATGACTGTGAACCTATCTAAAAGAATACAAAGAGCTCTTTTAGCTAGACACCCG
AAATGGCTACGACGACAAGAAAAGGCTTACTTATCAGGCTATAATTTACTTATGTTAACAACTGATGCTTTTTATCCTCA
ATGGAGACCAGTTCAATCTTCCAGCGGTTTTTGTCAAATTAAAGGAAATCTTCGCCCTTATTATGAAAGTTTTAAAGTCT
ATTATAAAAAAGAAAAGGATAAGAAGGTGCAAACGCTTTTTTCACCAAAATATTATGTTAAAATGGATAGTAATAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	42.903	96.875	0.416
coiA	Streptococcus pneumoniae Rx1	41.613	96.875	0.403
coiA	Streptococcus pneumoniae D39	41.613	96.875	0.403
coiA	Streptococcus pneumoniae R6	41.613	96.875	0.403
coiA	Streptococcus pneumoniae TIGR4	41.613	96.875	0.403
coiA	Lactococcus lactis subsp. cremoris KW2	39.329	100	0.403