Detailed information NTG1017590

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABX022_RS04535
• Genome accession: NZ_CP160072
• Coordinates: 1036602..1037780 (+)
• Length: 392 a.a.
• NCBI ID: WP_100125049.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Amel07
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1031602..1042780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABX022_RS04515 (ABX022_02190)	-	1032579..1033808 (+)	1230	WP_370580657.1	PilT/PilU family type 4a pilus ATPase	-
ABX022_RS04520 (ABX022_02185)	murU	1033941..1034642 (+)	702	WP_367483153.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
ABX022_RS04525 (ABX022_02180)	ruvC	1034773..1035324 (+)	552	WP_100115591.1	crossover junction endodeoxyribonuclease RuvC	-
ABX022_RS04530 (ABX022_15450)	-	1035429..1036214 (-)	786	WP_198224870.1	DUF2071 domain-containing protein	-
ABX022_RS04535 (ABX022_02160)	dprA	1036602..1037780 (+)	1179	WP_100125049.1	DNA-processing protein DprA	Machinery gene
ABX022_RS04540 (ABX022_15455)	-	1037792..1038250 (+)	459	WP_025329887.1	DUF494 family protein	-
ABX022_RS04545 (ABX022_15460)	topA	1038392..1040686 (+)	2295	WP_370580585.1	type I DNA topoisomerase	-
ABX022_RS04550 (ABX022_02105)	rsmD	1040764..1041336 (+)	573	WP_174829724.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABX022_RS04555 (ABX022_02100)	-	1041428..1041682 (+)	255	WP_037392355.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42127.10 Da
• Isoelectric Point: 6.4947

>NTDB_id=1017590 ABX022_RS04535 WP_100125049.1 1036602..1037780(+) (dprA) [Snodgrassella alvi strain Amel07]
MDTQERLAWIELALTPFVGAETFLRIIKYFGSAQNALSASAAEISPFCQRQISKYWHSDVAKQATEAAIEWEQAHTDARL
LLLADNDFPAMLTKGLTPPPLLFVRGDSQCLHQPALSIVGSRHATPQAMRITHDFAAALARKGVTIVSGMASGADTAAHQ
GALQAIGTTVAVWGTGIDRVYPARNKNLATQIAAHGCIISEFPLGTRPSPGNFPRRNRLIAALSQGTLVVEAATESGSLI
TARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLEDILQECPRLLQKKDLQSYSNRPHLQTDDISKSSTNTDS
SEDSLSVHSPDCILNPMEQQVLDGLGYGIMHPDMLVTALGMAATDVYAHLVTLELGGWITTLPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=1017590 ABX022_RS04535 WP_100125049.1 1036602..1037780(+) (dprA) [Snodgrassella alvi strain Amel07]
ATGGATACACAAGAACGCCTAGCCTGGATTGAATTGGCATTGACTCCGTTTGTAGGTGCTGAAACTTTTCTTCGCATAAT
TAAATATTTTGGTTCCGCGCAAAATGCTCTTAGTGCATCGGCTGCTGAAATATCGCCTTTTTGTCAACGGCAAATCAGTA
AGTATTGGCATAGTGATGTAGCAAAGCAGGCAACTGAAGCAGCTATAGAATGGGAGCAAGCGCATACTGATGCACGTTTA
TTACTACTAGCAGATAATGATTTTCCGGCAATGCTAACCAAGGGTTTAACACCGCCTCCATTATTGTTTGTTCGTGGTGA
TAGTCAGTGTTTGCATCAACCTGCTTTATCAATTGTTGGTAGTCGGCATGCAACACCACAAGCCATGCGCATTACACATG
ATTTTGCAGCTGCACTGGCACGGAAAGGTGTAACAATTGTTTCAGGCATGGCTAGTGGCGCAGATACAGCAGCACATCAG
GGTGCTTTGCAGGCAATCGGTACAACAGTGGCAGTTTGGGGTACAGGTATTGACAGAGTATATCCGGCACGCAACAAAAA
TTTAGCCACACAAATTGCAGCTCATGGCTGTATTATTTCTGAATTTCCCTTGGGTACTCGTCCTTCGCCGGGAAATTTTC
CGCGACGTAACCGCTTGATTGCTGCACTTAGTCAGGGTACGCTGGTAGTTGAAGCCGCAACTGAATCGGGCTCATTGATT
ACTGCAAGATTGGCTGGCGAAATGGGGCGGGAAGTTATGGCGATACCGGGTTCTATTGATAACCCTTTAAGTAAAGGCTG
CCACGCATTAATCAAACAGGGTGCCAAATTAGTAGAAAATCTGGAAGATATTTTGCAGGAATGTCCACGCCTCTTGCAAA
AAAAAGATTTGCAATCATATAGCAATCGTCCTCATCTGCAAACTGATGATATAAGTAAATCATCTACAAATACTGATAGT
TCAGAAGATTCATTATCAGTTCATTCACCAGATTGTATACTTAACCCGATGGAGCAGCAGGTGCTGGACGGACTGGGTTA
CGGCATAATGCATCCGGATATGTTAGTTACAGCACTTGGCATGGCTGCTACAGATGTGTATGCTCATCTCGTGACATTGG
AGCTTGGTGGCTGGATTACCACTCTGCCAGGCGGCTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (76-279)

• DprA winged helix domain (DprA_WH) (334-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.543	100	0.594
dprA	Neisseria meningitidis MC58	58.543	100	0.594
dprA	Neisseria gonorrhoeae strain FA1090	57.037	100	0.589
dprA	Neisseria gonorrhoeae MS11	56.79	100	0.587