Detailed information NTG1017533

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABX014_RS03765
• Genome accession: NZ_CP160070
• Coordinates: 814464..815645 (-)
• Length: 393 a.a.
• NCBI ID: WP_370578331.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Amel05
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 809464..820645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABX014_RS03745 (ABX014_14190)	-	810561..810815 (-)	255	WP_037392355.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ABX014_RS03750 (ABX014_14185)	rsmD	810907..811479 (-)	573	WP_370578330.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABX014_RS03755 (ABX014_14180)	topA	811558..813852 (-)	2295	WP_037476183.1	type I DNA topoisomerase	-
ABX014_RS03760 (ABX014_14175)	-	813994..814452 (-)	459	WP_037476181.1	DUF494 family protein	-
ABX014_RS03765 (ABX014_14170)	dprA	814464..815645 (-)	1182	WP_370578331.1	DNA-processing protein DprA	Machinery gene
ABX014_RS03770 (ABX014_20555)	-	816530..816829 (+)	300	WP_037476179.1	DUF6694 family lipoprotein	-
ABX014_RS03775 (ABX014_14160)	-	817661..818674 (+)	1014	WP_037476177.1	3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein	-
ABX014_RS03780 (ABX014_20560)	-	818671..819678 (+)	1008	WP_370578332.1	NAD-dependent epimerase/dehydratase family protein	-
ABX014_RS03785 (ABX014_20565)	-	819679..820485 (+)	807	WP_370578333.1	MBL fold metallo-hydrolase	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 42234.32 Da
• Isoelectric Point: 6.6118

>NTDB_id=1017533 ABX014_RS03765 WP_370578331.1 814464..815645(-) (dprA) [Snodgrassella alvi strain Amel05]
MNTQERLAWIELALTPFVGAETFLRIIKYFGSAQNALSASAAEVTPFFHHQQAGKYWHSKIAKQATEGALEWEQAHSDAR
LLLLVDNDFPAMLTNGLTPPPLLFVRGDSQCLHQPALSIVGSRHATPQAMRITRDFAAALAQKGVTIISGMASGADTAAH
QGALQAMGTTVAVWGTGIDRVYPARNKNLAAQIAAHGCIISEFPLGTRPSPGNFPRRNRLIAALSQGTLVVEAATESGSL
ITARLAGEMGREVMAIPGSIDNPLSKGCHTLIKQGAKLVENLEDILQECPHLLQKKDLQSYSHRPHLQTDDMSKSSISAD
GLEDLSSAQSLDCILNPMEQQVLDGLGYGIMHPDMLVTTLGMAATDVYAHLVTLELGGWITTLPGGCYQRIKS

Nucleotide

• Length: 1182 bp

>NTDB_id=1017533 ABX014_RS03765 WP_370578331.1 814464..815645(-) (dprA) [Snodgrassella alvi strain Amel05]
ATGAATACACAAGAACGCCTTGCCTGGATTGAATTGGCATTGACTCCGTTTGTTGGTGCTGAAACTTTTCTTCGTATAAT
TAAATATTTTGGTTCTGCACAAAATGCTCTGAGTGCATCTGCTGCTGAAGTAACTCCTTTTTTTCATCATCAGCAAGCCG
GTAAATATTGGCACAGTAAAATAGCTAAACAGGCAACAGAAGGTGCTTTAGAGTGGGAGCAGGCGCATTCTGATGCACGT
TTATTATTACTGGTAGATAATGATTTTCCGGCAATGTTAACTAATGGATTGACGCCGCCACCATTATTGTTTGTTCGTGG
TGATAGCCAGTGTTTGCATCAACCTGCTTTATCAATTGTTGGTAGTCGGCATGCTACTCCACAAGCCATGCGCATTACTC
GTGATTTTGCTGCTGCGCTGGCTCAGAAAGGTGTAACAATTATTTCAGGTATGGCTAGTGGCGCAGATACAGCAGCACAT
CAGGGTGCTTTGCAGGCGATGGGTACAACAGTAGCAGTTTGGGGTACAGGTATTGACAGAGTATATCCGGCACGCAACAA
AAATTTAGCGGCACAAATTGCTGCTCATGGCTGTATTATTTCTGAATTTCCTTTAGGTACTCGTCCTTCTCCGGGAAATT
TTCCACGACGTAACCGCTTGATTGCTGCACTTAGTCAGGGTACGCTGGTAGTTGAAGCTGCAACTGAATCAGGTTCTCTG
ATTACTGCAAGACTGGCCGGAGAAATGGGACGGGAAGTTATGGCAATACCGGGTTCTATTGATAACCCTTTAAGTAAAGG
CTGTCACACATTAATCAAACAAGGCGCCAAATTAGTAGAAAATCTGGAAGATATTTTGCAGGAGTGCCCGCACCTCTTGC
AAAAAAAAGATTTGCAATCATATAGCCATCGTCCTCATCTGCAAACTGATGATATGAGTAAATCGTCTATAAGTGCTGAT
GGTTTAGAAGATTTATCATCAGCTCAGTCGCTGGATTGTATACTTAATCCGATGGAGCAGCAGGTGTTGGACGGACTGGG
TTACGGCATAATGCATCCGGATATGTTGGTTACAACACTTGGCATGGCTGCAACAGATGTGTATGCTCACCTCGTGACAT
TGGAGCTTGGTGGCTGGATCACTACCCTGCCAGGCGGTTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (335-386)

• DNA recombination-mediator protein A (DNA_processg_A) (77-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.543	100	0.593
dprA	Neisseria meningitidis MC58	58.543	100	0.593
dprA	Neisseria gonorrhoeae strain FA1090	58.04	100	0.588
dprA	Neisseria gonorrhoeae MS11	57.789	100	0.585