Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ABXO38_RS12550 | Genome accession | NZ_CP160024 |
| Coordinates | 2561633..2562028 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain 23EV612 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2556633..2567028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXO38_RS12520 (ABXO38_12510) | - | 2557892..2558296 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| ABXO38_RS12525 (ABXO38_12515) | - | 2558634..2558726 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| ABXO38_RS12530 (ABXO38_12520) | - | 2558858..2559091 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ABXO38_RS12535 (ABXO38_12525) | murA | 2559202..2560467 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ABXO38_RS12540 (ABXO38_12530) | fabZ | 2560501..2560941 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ABXO38_RS12545 (ABXO38_12535) | - | 2560999..2561439 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| ABXO38_RS12550 (ABXO38_12540) | ssb | 2561633..2562028 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| ABXO38_RS12555 (ABXO38_12545) | sceD | 2562417..2563112 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| ABXO38_RS12560 (ABXO38_12550) | tenA | 2563636..2564325 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| ABXO38_RS12565 (ABXO38_12555) | thiD | 2564318..2565148 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ABXO38_RS12570 (ABXO38_12560) | thiM | 2565132..2565932 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| ABXO38_RS12575 (ABXO38_12565) | thiE | 2565925..2566566 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=1017119 ABXO38_RS12550 WP_000932692.1 2561633..2562028(+) (ssb) [Staphylococcus aureus strain 23EV612]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1017119 ABXO38_RS12550 WP_000932692.1 2561633..2562028(+) (ssb) [Staphylococcus aureus strain 23EV612]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |